RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 COL8A1P27658 744 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 CDKN1AP38936 164 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 CBX5P45973 191 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 ASAH1Q13510 395 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 KLF9Q13886 244 aaPredicted RBP10.21□□□□□ -0.78
HERC1-205ENST00000559886 PAN3Q58A45 887 aaKnown RBP10.21□□□□□ -0.78
HERC1-205ENST00000559886 SHEQ5VZ18 495 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 STUMQ69YW2 141 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 BPIFB2Q8N4F0 458 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 SETD6Q8TBK2 473 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 DYRK2Q92630 601 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 C14orf79Q96F83 325 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 HDHD3Q9BSH5 251 aaPredicted RBP10.21□□□□□ -0.78
HERC1-205ENST00000559886 DLL4Q9NR61 685 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 TAS2R8Q9NYW2 309 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 ANAPC10Q9UM13 185 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 PPIAL4EA0A075B759 164 aa10.2□□□□□ -0.78
HERC1-205ENST00000559886 LINC00854A0A1B0GVQ3 168 aa10.2□□□□□ -0.78
HERC1-205ENST00000559886 PPIAL4DF5H284 164 aa10.2□□□□□ -0.78
HERC1-205ENST00000559886 LGALS8O00214 317 aa10.2□□□□□ -0.78
HERC1-205ENST00000559886 PSPNO60542 156 aa10.2□□□□□ -0.78
HERC1-205ENST00000559886 RP2O75695 350 aa10.2□□□□□ -0.78
HERC1-205ENST00000559886 ECDO95905 644 aaPredicted RBP10.2□□□□□ -0.78
HERC1-205ENST00000559886 TFF1P04155 84 aa10.2□□□□□ -0.78
HERC1-205ENST00000559886 PPIAL4FP0DN26 164 aa10.2□□□□□ -0.78
HERC1-205ENST00000559886 DEFA1P59665 94 aa10.2□□□□□ -0.78
HERC1-205ENST00000559886 DEFA3P59666 94 aa10.2□□□□□ -0.78
HERC1-205ENST00000559886 COL10A1Q03692 680 aa10.2□□□□□ -0.78
HERC1-205ENST00000559886 GVQW1Q8N7I0 195 aa10.2□□□□□ -0.78
HERC1-205ENST00000559886 NEK7Q8TDX7 302 aa10.2□□□□□ -0.78
HERC1-205ENST00000559886 ZNF107Q9UII5 783 aaPredicted RBP10.2□□□□□ -0.78
HERC1-205ENST00000559886 METRNQ9UJH8 293 aa10.2□□□□□ -0.78
HERC1-205ENST00000559886 PPIAL4AQ9Y536 164 aa10.2□□□□□ -0.78
HERC1-205ENST00000559886 TRAV38-1A0A0B4J264 116 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 LYNX1G3V0Z9 82 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 LYNX1P0DP58 116 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 NAT1P18440 290 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 RCVRNP35243 200 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 AP3S2P59780 193 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 MRPS15P82914 257 aaKnown RBP10.19□□□□□ -0.78
HERC1-205ENST00000559886 DYRK1AQ13627 763 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 POC5Q8NA72 575 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 DEFB108BQ8NET1 73 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 C12orf4Q9NQ89 552 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 IFT46Q9NQC8 304 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 TMEM82A0PJX8 343 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 ZNF737O75373 536 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 FSTL3O95633 263 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 NAPSAO96009 420 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 CSF1P09603 554 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 AMY2BP19961 511 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 DTYMKP23919 212 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 MDH2P40926 338 aaKnown RBP10.19□□□□□ -0.78
HERC1-205ENST00000559886 GABRA2P47869 451 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 RGS21Q2M5E4 152 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 C17orf107Q6ZR85 190 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 DEDD2Q8WXF8 326 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 SDSLQ96GA7 329 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 COX4I2Q96KJ9 171 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 CHST6Q9GZX3 395 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 PPA2Q9H2U2 334 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 TMEM165Q9HC07 324 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 ETAA1Q9NY74 926 aa10.19□□□□□ -0.78
HERC1-205ENST00000559886 LY6HO94772 140 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 F12P00748 615 aaPredicted RBP10.18□□□□□ -0.78
HERC1-205ENST00000559886 FCER2P06734 321 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 FCGR3AP08637 254 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 DAOP14920 347 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 ATPAF1Q5TC12 328 aaPredicted RBP10.18□□□□□ -0.78
HERC1-205ENST00000559886 HOGA1Q86XE5 327 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 TMEM229BQ8NBD8 167 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 SHARPINQ9H0F6 387 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 C11orf54Q9H0W9 315 aaPredicted RBP10.18□□□□□ -0.78
HERC1-205ENST00000559886 RIMS4Q9H426 269 aaPredicted RBP10.18□□□□□ -0.78
HERC1-205ENST00000559886 ZNF230Q9UIE0 474 aaPredicted RBP10.18□□□□□ -0.78
HERC1-205ENST00000559886 KIAA2026Q5HYC2 2103 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 DSCAML1Q8TD84 2053 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 LYRM1O43325 122 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 GYPAP02724 150 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 OR3A1P47881 315 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 KCNJ3P48549 501 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 EFNA4P52798 201 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 TAS2R19P59542 299 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 Q6ZPA2 131 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 ZNF788Q6ZQV5 615 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 GAPTQ8N292 157 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 ZNF561Q8N587 486 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 OR4S1Q8NGB4 309 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 PLPPR1Q8TBJ4 325 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 SNAPC3Q92966 411 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 SNX22Q96L94 193 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 CCL19Q99731 98 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 ST6GALNAC5Q9BVH7 336 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 DNTTIP1Q9H147 329 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 ZNF701Q9NV72 531 aaPredicted RBP10.18□□□□□ -0.78
HERC1-205ENST00000559886 MAB21L2Q9Y586 359 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 SPG11Q96JI7 2443 aa10.18□□□□□ -0.78
HERC1-205ENST00000559886 TACC2O95359 2948 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 TRBV6-6A0A0A6YYG2 114 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 TNFRSF13BO14836 293 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms