RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 VCX3BQ9H321 246 aa12.08□□□□□ -0.48
RABGGTA-211ENST00000559850 SEBOXQ9HB31 216 aaPredicted RBP12.08□□□□□ -0.48
RABGGTA-211ENST00000559850 ANK2Q01484 3957 aa12.08□□□□□ -0.48
RABGGTA-211ENST00000559850 KIAA2026Q5HYC2 2103 aa12.08□□□□□ -0.48
RABGGTA-211ENST00000559850 A0A1W2PP11 408 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 hADV38S2A0JD32 116 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 GPR137BO60478 399 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 MAS1P04201 325 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 IGHV1-8P0DP01 117 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 SERPINA2P20848 420 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 MDKP21741 143 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 LMO1P25800 156 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 PTGFRP43088 359 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 RELBQ01201 579 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 MEF2CQ06413 473 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 ACSM1Q08AH1 577 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 IRF3Q14653 427 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 PLA1AQ53H76 456 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 FAM27D1Q5T7N8 215 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 PPP1R35Q8TAP8 253 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 MUL1Q969V5 352 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 CPNE2Q96FN4 548 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 COQ2Q96H96 371 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 TMED9Q9BVK6 235 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 CCDC90BQ9GZT6 254 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 HEXA-AS1Q9H8Q6 139 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 CKLFQ9UBR5 152 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 TPRKBQ9Y3C4 175 aa12.07□□□□□ -0.48
RABGGTA-211ENST00000559850 TRAV24A0A0B4J272 114 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 hCG_1809904A0A1W2PP81 198 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 A0A1W2PPE2 198 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 A0A1W2PR64 198 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 A0A1W2PRV1 198 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 FAM172BPA6NC97 362 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 ARG1P05089 322 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 FSTP19883 344 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 GDNFP39905 211 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 MAP2K4P45985 399 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 SPHARQ15513 63 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 MIDNQ504T8 468 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 KRBOX4Q5JUW0 171 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 LDLRAD2Q5SZI1 272 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 PRAMEF5Q5TYX0 476 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 RNLSQ5VYX0 342 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 ELP2Q6IA86 826 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 ASCL4Q6XD76 172 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 DYNAPQ8N1N2 210 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 JAGN1Q8N5M9 183 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 TMEM86BQ8N661 226 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 METTL9Q9H1A3 318 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 DUSP21Q9H596 190 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 RHOFQ9HBH0 211 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 C1RLQ9NZP8 487 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 POMT1Q9Y6A1 747 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 LINC00312Q9Y6C7 94 aa12.06□□□□□ -0.48
RABGGTA-211ENST00000559850 H3BUX3 64 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 RGS10O43665 173 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 GPX5O75715 221 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 CRYBA1P05813 215 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 HSMCR30P0CW71 290 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 JUNBP17275 347 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 CRHBPP24387 322 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 ERP29P30040 261 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 GP2P55259 537 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 FOXL1Q12952 345 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 DYNC1I2Q13409 638 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 LY6EQ16553 131 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 SLC22A6Q4U2R8 563 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 ACSM3Q53FZ2 586 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 PAN3Q58A45 887 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 UTF1Q5T230 341 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 BRICD5Q6PL45 260 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 BEND2Q8NDZ0 799 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 OR51T1Q8NGJ9 327 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 PLPPR1Q8TBJ4 325 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 CYYR1Q96J86 154 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 DPAGT1Q9H3H5 408 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 ST3GAL6Q9Y274 331 aa12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 MRPS28Q9Y2Q9 187 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-211ENST00000559850 TRAV39A0A0B4J263 110 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 ODAMA1E959 279 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 GEMIN2O14893 280 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 CLPXO76031 633 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 CD1AP06126 327 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 HSPA13P48723 471 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 RAG2P55895 527 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 LGALS4P56470 323 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 BDH1Q02338 343 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 LIPKQ5VXJ0 399 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 GLIPR1L1Q6UWM5 242 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 OSR2Q8N2R0 312 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 CHST4Q8NCG5 386 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 Q8NFD4 153 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 OR4D6Q8NGJ1 314 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 TMEM203Q969S6 136 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 S100A13Q99584 98 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 SSX3Q99909 188 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 KIF25Q9UIL4 384 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 VPREB3Q9UKI3 123 aa12.04□□□□□ -0.48
RABGGTA-211ENST00000559850 UBE2J1Q9Y385 318 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms