RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 NKAPLQ5M9Q1 402 aa13.92□□□□□ -0.18
TPM1-219ENST00000559397 PRAMEF6Q5VXH4 476 aa13.92□□□□□ -0.18
TPM1-219ENST00000559397 HOGA1Q86XE5 327 aa13.92□□□□□ -0.18
TPM1-219ENST00000559397 C11orf53Q8IXP5 236 aa13.92□□□□□ -0.18
TPM1-219ENST00000559397 SCCPDHQ8NBX0 429 aa13.92□□□□□ -0.18
TPM1-219ENST00000559397 OR51S1Q8NGJ8 323 aa13.92□□□□□ -0.18
TPM1-219ENST00000559397 NEU4Q8WWR8 484 aaPredicted RBP13.92□□□□□ -0.18
TPM1-219ENST00000559397 LURAP1Q96LR2 239 aa13.92□□□□□ -0.18
TPM1-219ENST00000559397 EGLN1Q9GZT9 426 aa13.92□□□□□ -0.18
TPM1-219ENST00000559397 TLNRD1Q9H1K6 362 aa13.92□□□□□ -0.18
TPM1-219ENST00000559397 DECR2Q9NUI1 292 aa13.92□□□□□ -0.18
TPM1-219ENST00000559397 SLC2A8Q9NY64 477 aa13.92□□□□□ -0.18
TPM1-219ENST00000559397 IGHV3-64DA0A0J9YX35 117 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 M0QYG6 137 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 TPD52L2O43399 206 aaKnown RBP13.91□□□□□ -0.18
TPM1-219ENST00000559397 NDUFS7O75251 213 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 PEX14O75381 377 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 RHBDL1O75783 438 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 GRPP07492 148 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 FUT3P21217 361 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 ERVK11-1P61568 191 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 RBMS2Q15434 407 aaKnown RBP13.91□□□□□ -0.18
TPM1-219ENST00000559397 MPV17LQ2QL34 196 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 C11orf91Q3C1V1 193 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 OR52W1Q6IF63 320 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 SULT4A1Q9BR01 284 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 FAAP24Q9BTP7 215 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 GHITMQ9H3K2 345 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 SAP30LQ9HAJ7 183 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 RCC2Q9P258 522 aaKnown RBP13.91□□□□□ -0.18
TPM1-219ENST00000559397 POLDIP2Q9Y2S7 368 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 ASH1LQ9NR48 2969 aaKnown RBP13.91□□□□□ -0.18
TPM1-219ENST00000559397 TNFRSF1AP19438 455 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 CD300CQ08708 224 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 IL13RA2Q14627 380 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 ACTBL2Q562R1 376 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 RNASE10Q5GAN6 216 aaKnown RBP13.91□□□□□ -0.18
TPM1-219ENST00000559397 LINC00596Q86U02 117 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 BPIFB2Q8N4F0 458 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 SLC6A7Q99884 636 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 GCM1Q9NP62 436 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 AK3Q9UIJ7 227 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 FLVCR2Q9UPI3 526 aa13.91□□□□□ -0.18
TPM1-219ENST00000559397 TANC2Q9HCD6 1990 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 ITPR2Q14571 2701 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 NOS1APO75052 506 aaPredicted RBP13.9□□□□□ -0.18
TPM1-219ENST00000559397 OR7C1O76099 320 aaPredicted RBP13.9□□□□□ -0.18
TPM1-219ENST00000559397 LY6HO94772 140 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 F12P00748 615 aaPredicted RBP13.9□□□□□ -0.18
TPM1-219ENST00000559397 AMY2AP04746 511 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 PGA5P0DJD9 388 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 ZMYND11Q15326 602 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 VAX1Q5SQQ9 334 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 AKAP14Q86UN6 197 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 Q8IYB0 196 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 FAM58AQ8N1B3 248 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 BATF2Q8N1L9 274 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 OR4K15Q8NH41 348 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 HPS1Q92902 700 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 ZNF488Q96MN9 340 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 NRIP2Q9BQI9 281 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 IL36RNQ9UBH0 155 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 EDARQ9UNE0 448 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 POLQO75417 2590 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 DYSFO75923 2080 aa13.9□□□□□ -0.18
TPM1-219ENST00000559397 A0A0A6YYJ9 748 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 DISC1C4P0D8 188 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 H3BUI4 141 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 ARPC1BO15143 372 aaKnown RBP13.89□□□□□ -0.19
TPM1-219ENST00000559397 IGHV4-39P01824 125 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 HNRNPCP07910 306 aaKnown RBP eCLIP13.89□□□□□ -0.19
TPM1-219ENST00000559397 DTYMKP23919 212 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 HRH1P35367 487 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 EFNA4P52798 201 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 MICBQ29980 383 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 MOGAT3Q86VF5 341 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 TGIF2LYQ8IUE0 185 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 Q8TCH9 128 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 NINJ1Q92982 152 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 ERGIC1Q969X5 290 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 SLC25A21Q9BQT8 299 aaPredicted RBP13.89□□□□□ -0.19
TPM1-219ENST00000559397 GINS4Q9BRT9 223 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 GSX2Q9BZM3 304 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 CHST6Q9GZX3 395 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 IFT22Q9H7X7 185 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 UFSP2Q9NUQ7 469 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 SCP2D1Q9UJQ7 156 aa13.89□□□□□ -0.19
TPM1-219ENST00000559397 CDIPTO14735 213 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 PRAF2O60831 178 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 IL5P05113 134 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 PRKACAP17612 351 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 DNASE1P24855 282 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 COL8A2P25067 703 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 RBMXP38159 391 aaKnown RBP13.88□□□□□ -0.19
TPM1-219ENST00000559397 SNU13P55769 128 aaKnown RBP13.88□□□□□ -0.19
TPM1-219ENST00000559397 PDCD1Q15116 288 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 IDO2Q6ZQW0 420 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 ZNF826PQ6ZT77 177 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 BEST4Q8NFU0 473 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 OR13C8Q8NGS7 320 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms