RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 TRAV39A0A0B4J263 110 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 hCG_1809904A0A1W2PP81 198 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 A0A1W2PPE2 198 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 A0A1W2PR64 198 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 A0A1W2PRV1 198 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 hADV38S2A0JD32 116 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 MAGEA13PA6NCF6 341 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 CLDN34H7C241 214 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 KDM4BO94953 1096 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 IGHV3-7P01780 117 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 MAS1P04201 325 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 JUNBP17275 347 aaPredicted RBP9.77□□□□□ -0.85
TPM1-216ENST00000558910 GLIPR1P48060 266 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 COMPP49747 757 aaPredicted RBP9.77□□□□□ -0.85
TPM1-216ENST00000558910 GABPB1Q06547 395 aaPredicted RBP9.77□□□□□ -0.85
TPM1-216ENST00000558910 FAM189A2Q15884 450 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 LTC4SQ16873 150 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 PIGYQ3MUY2 71 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 HIST2H2BDQ6DRA6 164 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 DHRS7BQ6IAN0 325 aaPredicted RBP9.77□□□□□ -0.85
TPM1-216ENST00000558910 ASPHD2Q6ICH7 369 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 CRIP3Q6Q6R5 217 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 TCF23Q7RTU1 214 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 PARP16Q8N5Y8 322 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 SMIM19Q96E16 107 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 OR14A2Q96R54 314 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 SSX3Q99909 188 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 ZNF581Q9P0T4 197 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 PSORS1C1Q9UIG5 152 aa9.77□□□□□ -0.85
TPM1-216ENST00000558910 H0YJX3 145 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 OGG1O15527 345 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 MMP23AO75900 390 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 MT-ND2P03891 347 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 CELP19835 753 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 SERPINA2P20848 420 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 BDKRB2P30411 391 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 ZNF93P35789 620 aaPredicted RBP9.76□□□□□ -0.85
TPM1-216ENST00000558910 DLX6P56179 175 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 P2RX3P56373 397 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 ZP1P60852 638 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 INSL4Q14641 139 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 SSX2Q16385 188 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 CCDC58Q4VC31 144 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 PAN3Q58A45 887 aaKnown RBP9.76□□□□□ -0.85
TPM1-216ENST00000558910 KRBOX4Q5JUW0 171 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 C1orf122Q6ZSJ8 110 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 LDLRAD3Q86YD5 345 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 DYNAPQ8N1N2 210 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 JAGN1Q8N5M9 183 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 C11orf42Q8N5U0 333 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 OR13D1Q8NGV5 346 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 OR52N1Q8NH53 320 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 PPP1R35Q8TAP8 253 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 NDNFQ8TB73 568 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 TFAP2CQ92754 450 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 S100A13Q99584 98 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 CCDC90BQ9GZT6 254 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 PPIL3Q9H2H8 161 aaKnown RBP9.76□□□□□ -0.85
TPM1-216ENST00000558910 PRDM13Q9H4Q3 707 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 SIGLEC9Q9Y336 463 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 HILPDAQ9Y5L2 63 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 POMT1Q9Y6A1 747 aa9.76□□□□□ -0.85
TPM1-216ENST00000558910 TRAV8-7A0A075B6U6 113 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 A0A0G2JK05 382 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 A0A1W2PP11 408 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 SLC33A1O00400 549 aaPredicted RBP9.75□□□□□ -0.85
TPM1-216ENST00000558910 MGST3O14880 152 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 IGHV1-8P0DP01 117 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 NFYBP25208 207 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 GLP1RP43220 463 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 RIPK1Q13546 671 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 RBM39Q14498 530 aaKnown RBP9.75□□□□□ -0.85
TPM1-216ENST00000558910 ZNF146Q15072 292 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 SLC22A6Q4U2R8 563 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 SPIN3Q5JUX0 258 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 DMKNQ6E0U4 476 aaPredicted RBP9.75□□□□□ -0.85
TPM1-216ENST00000558910 Q6P435 159 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 TMEM86BQ8N661 226 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 OR4F5Q8NH21 305 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 UBALD1Q8TB05 177 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 DYRK2Q92630 601 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 MUL1Q969V5 352 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 ZNF184Q99676 751 aaPredicted RBP9.75□□□□□ -0.85
TPM1-216ENST00000558910 ZNF747Q9BV97 191 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 TMED9Q9BVK6 235 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 BEX1Q9HBH7 125 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 VPREB3Q9UKI3 123 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 ERGIC3Q9Y282 383 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 HSPE1-MOB4S4R3N1 261 aa9.75□□□□□ -0.85
TPM1-216ENST00000558910 TRGV10A0A0A0MS01 117 aa9.74□□□□□ -0.85
TPM1-216ENST00000558910 C17orf98A8MV24 154 aa9.74□□□□□ -0.85
TPM1-216ENST00000558910 CSTBP04080 98 aaKnown RBP9.74□□□□□ -0.85
TPM1-216ENST00000558910 HSMCR30P0CW71 290 aa9.74□□□□□ -0.85
TPM1-216ENST00000558910 CDK2P24941 298 aa9.74□□□□□ -0.85
TPM1-216ENST00000558910 TGFBR2P37173 567 aa9.74□□□□□ -0.85
TPM1-216ENST00000558910 GDNFP39905 211 aa9.74□□□□□ -0.85
TPM1-216ENST00000558910 PTGFRP43088 359 aa9.74□□□□□ -0.85
TPM1-216ENST00000558910 WNT4P56705 351 aa9.74□□□□□ -0.85
TPM1-216ENST00000558910 ACSM1Q08AH1 577 aa9.74□□□□□ -0.85
TPM1-216ENST00000558910 MED22Q15528 200 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms