RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 OPN4Q9UHM6 478 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 FZR1Q9UM11 496 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 TENM4Q6N022 2769 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 SPTBN1Q01082 2364 aaKnown RBP10.97□□□□□ -0.65
SMAD3-207ENST00000558763 C9orf170A2RU37 121 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 SIX6O95475 246 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 CLDN14O95500 239 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 HLA-AP01891 365 aaKnown RBP10.97□□□□□ -0.65
SMAD3-207ENST00000558763 RPS2P15880 293 aaKnown RBP10.97□□□□□ -0.65
SMAD3-207ENST00000558763 OR3A3P47888 321 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 FBXL19-AS1Q494R0 122 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 Q6P435 159 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 Q6ZS49 121 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 LINC00596Q86U02 117 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 C12orf45Q8N5I9 185 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-207ENST00000558763 TMEM185AQ8NFB2 350 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 TLNRD1Q9H1K6 362 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 PLK3Q9H4B4 646 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 RANBP3Q9H6Z4 567 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-207ENST00000558763 ZNF442Q9H7R0 627 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 TMEM210A6NLX4 147 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 M0R1B8 84 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 CDIPTO14735 213 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 TPD52L2O43399 206 aaKnown RBP10.96□□□□□ -0.65
SMAD3-207ENST00000558763 RNF224P0DH78 156 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 FABP6P51161 128 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 TSPAN5P62079 268 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 SUPT4H1P63272 117 aaKnown RBP10.96□□□□□ -0.65
SMAD3-207ENST00000558763 BAMBIQ13145 260 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 IKZF1Q13422 519 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 OR8G1Q15617 311 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 GRK1Q15835 563 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 ZNF718Q3SXZ3 478 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 UNQ6126/PRO20091Q6UXV3 157 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 C1orf174Q8IYL3 243 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 MITD1Q8WV92 249 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 MUCL1Q96DR8 90 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 LRRC46Q96FV0 321 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 CHIAQ9BZP6 476 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 RHOFQ9HBH0 211 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 HES4Q9HCC6 221 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 TMEM100Q9NV29 134 aa10.96□□□□□ -0.65
SMAD3-207ENST00000558763 UTP20O75691 2785 aaKnown RBP10.96□□□□□ -0.66
SMAD3-207ENST00000558763 ICE1Q9Y2F5 2266 aa10.96□□□□□ -0.66
SMAD3-207ENST00000558763 IGHV3-64DA0A0J9YX35 117 aa10.96□□□□□ -0.66
SMAD3-207ENST00000558763 GOSR2O14653 212 aa10.96□□□□□ -0.66
SMAD3-207ENST00000558763 ACAA1P09110 424 aaPredicted RBP10.96□□□□□ -0.66
SMAD3-207ENST00000558763 PLA2G2AP14555 144 aa10.96□□□□□ -0.66
SMAD3-207ENST00000558763 ZNF250P15622 560 aa10.96□□□□□ -0.66
SMAD3-207ENST00000558763 PPP3CBP16298 524 aa10.96□□□□□ -0.66
SMAD3-207ENST00000558763 PI3P19957 117 aa10.96□□□□□ -0.66
SMAD3-207ENST00000558763 AGAP20933 346 aa10.96□□□□□ -0.66
SMAD3-207ENST00000558763 TFF3Q07654 80 aa10.96□□□□□ -0.66
SMAD3-207ENST00000558763 MPPED2Q15777 294 aa10.96□□□□□ -0.66
SMAD3-207ENST00000558763 LRP11Q86VZ4 500 aa10.96□□□□□ -0.66
SMAD3-207ENST00000558763 SUMF2Q8NBJ7 301 aa10.96□□□□□ -0.66
SMAD3-207ENST00000558763 GRPEL2Q8TAA5 225 aa10.96□□□□□ -0.66
SMAD3-207ENST00000558763 GTF3AQ92664 365 aaKnown RBP10.96□□□□□ -0.66
SMAD3-207ENST00000558763 TMEM246Q9BRR3 403 aa10.96□□□□□ -0.66
SMAD3-207ENST00000558763 MGAT4AQ9UM21 535 aa10.96□□□□□ -0.66
SMAD3-207ENST00000558763 DOPEY1Q5JWR5 2465 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 DBX1A6NMT0 343 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 F5H5P2 479 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 TIMM8AO60220 97 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-207ENST00000558763 NOS1APO75052 506 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-207ENST00000558763 ZNF205O95201 554 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 OR5H8P0DN80 308 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 DNASE1P24855 282 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 ARPC4P59998 168 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 RAP2BP61225 183 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 HOXA4Q00056 320 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-207ENST00000558763 SURF2Q15527 256 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-207ENST00000558763 C1QTNF12Q5T7M4 302 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 SLC22A25Q6T423 547 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 DHRS11Q6UWP2 260 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 C20orf204Q6ZNR8 217 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 C5orf24Q7Z6I8 188 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 TMEM17Q86X19 198 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 WFDC8Q8IUA0 241 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 OR5M8Q8NGP6 311 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 TMEM171Q8WVE6 324 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 ZNF2Q9BSG1 426 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-207ENST00000558763 FXYD6Q9H0Q3 95 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 WDR13Q9H1Z4 485 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 MSL2Q9HCI7 577 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 POLDIP2Q9Y2S7 368 aa10.95□□□□□ -0.66
SMAD3-207ENST00000558763 LRRK2Q5S007 2527 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 FAM172BPA6NC97 362 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 DUS4LO95620 317 aaKnown RBP10.94□□□□□ -0.66
SMAD3-207ENST00000558763 GSTT2P0CG29 244 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 AKR1C4P17516 323 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 HLA-GP17693 338 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 TAS2R31P59538 309 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 SNRPD2P62316 118 aaKnown RBP10.94□□□□□ -0.66
SMAD3-207ENST00000558763 SRSF4Q08170 494 aaKnown RBP10.94□□□□□ -0.66
SMAD3-207ENST00000558763 ZNF146Q15072 292 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 SRSF7Q16629 238 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMAD3-207ENST00000558763 TMEM128Q5BJH2 165 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 RGS7BPQ6MZT1 257 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-207ENST00000558763 ZNF826PQ6ZT77 177 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 194.5 ms