RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 MRPS22P82650 360 aaKnown RBP4.23□□□□□ -1.73
RTF1-204ENST00000558117 TMEM155Q4W5P6 130 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 TSPO2Q5TGU0 170 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 ATRAIDQ6UW56 229 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 HACD2Q6Y1H2 254 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 ZNF730Q6ZMV8 503 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 CEACAM19Q7Z692 300 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 MTERF4Q7Z6M4 381 aaKnown RBP4.23□□□□□ -1.73
RTF1-204ENST00000558117 THOC6Q86W42 341 aaKnown RBP4.23□□□□□ -1.73
RTF1-204ENST00000558117 CPNE9Q8IYJ1 553 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 C11orf42Q8N5U0 333 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 TRIML2Q8N7C3 387 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 CSNK1G2-AS1Q8NCQ2 148 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 OR52R1Q8NGF1 315 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 OR4Q3Q8NH05 313 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 ZFP90Q8TF47 636 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 CCDC126Q96EE4 140 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 PPP1R2P1Q96PQ5 205 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 NAT9Q9BTE0 207 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 ELOVL6Q9H5J4 265 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 SPACA1Q9HBV2 294 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 TREX1Q9NSU2 369 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 MRPL39Q9NYK5 338 aaKnown RBP4.23□□□□□ -1.73
RTF1-204ENST00000558117 SIGLEC8Q9NYZ4 499 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 IL36GQ9NZH8 169 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 MAT2BQ9NZL9 334 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 EMC3Q9P0I2 261 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 LGALS13Q9UHV8 139 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 PHF11Q9UIL8 331 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 ZNF221Q9UK13 617 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 FBXO5Q9UKT4 447 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 DHRS7Q9Y394 339 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 ASB4Q9Y574 426 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 KIAA2026Q5HYC2 2103 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 AGRNO00468 2067 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 A0A0A6YYD4 124 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 IGHV3-16A0A0C4DH30 117 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 A0A1W2PPV4 95 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 TMEM120BA0PK00 339 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 TEX46H3BTG2 121 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 C8GP07360 202 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 H2BFMP0C1H6 154 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 CBR1P16152 277 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 CNTFRP26992 372 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 ELK4P28324 431 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 CFHR2P36980 270 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 SSR2P43308 183 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 CDKN2DP55273 166 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 TAS2R39P59534 338 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 GNGT1P63211 74 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 PAX5Q02548 391 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 TRMT12Q53H54 448 aaKnown RBP4.22□□□□□ -1.73
RTF1-204ENST00000558117 HHATQ5VTY9 493 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 LEMD1Q68G75 181 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 LGALS9CQ6DKI2 356 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 CYS1Q717R9 158 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 TPRA1Q86W33 373 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 LRRC28Q86X40 367 aaPredicted RBP4.22□□□□□ -1.73
RTF1-204ENST00000558117 Q8N2B8 174 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 ASCC1Q8N9N2 400 aaKnown RBP4.22□□□□□ -1.73
RTF1-204ENST00000558117 OR1L6Q8NGR2 347 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 OR1K1Q8NGR3 316 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 MARCH1Q8TCQ1 289 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 CD200R1Q8TD46 325 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 ACMSDQ8TDX5 336 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 CDKL2Q92772 493 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 CIDECQ96AQ7 238 aaPredicted RBP4.22□□□□□ -1.73
RTF1-204ENST00000558117 WDR34Q96EX3 536 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 IL4I1Q96RQ9 567 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 MS4A8Q9BY19 250 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 FAM107BQ9H098 131 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 IKZF5Q9H5V7 419 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 ZNF702PQ9H963 129 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 NKIRAS1Q9NYS0 192 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 PTTG3PQ9NZH4 202 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 MTCH1Q9NZJ7 389 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 THYN1Q9P016 225 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 TAAR3PQ9P1P4 343 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 IKZF2Q9UKS7 526 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 SLC22A14Q9Y267 594 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 RASD1Q9Y272 281 aa4.22□□□□□ -1.73
RTF1-204ENST00000558117 GJE1A6NN92 205 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 C12orf71A8MTZ7 269 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 FBP2O00757 339 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 COPEO14579 308 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 SH3BGRLO75368 114 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 STX11O75558 287 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 RENP00797 406 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 IGF2P01344 180 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 MBP02144 154 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 NEFHP12036 1026 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 CPMP14384 443 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 SPRP35270 261 aaPredicted RBP4.21□□□□□ -1.74
RTF1-204ENST00000558117 GPR4P46093 362 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 SERPINB9P50453 376 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 XKP51811 444 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 UBE2NP61088 152 aaKnown RBP4.21□□□□□ -1.74
RTF1-204ENST00000558117 PSPHP78330 225 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 FOXF1Q12946 379 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 SLAQ13239 276 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms