RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 TPBGQ13641 420 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 GPR176Q14439 515 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 EDDM3AQ14507 147 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 TBCEQ15813 527 aaPredicted RBP10.24□□□□□ -0.77
SLIRP-211ENST00000557623 DEFB112Q30KQ8 113 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 ACSM3Q53FZ2 586 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 UNQ9370/PRO34162Q6UXP9 181 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 PHC2Q8IXK0 858 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 ZDHHC22Q8N966 263 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 Q8NFD4 153 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 OR4S1Q8NGB4 309 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 OR51T1Q8NGJ9 327 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 TNFRSF14Q92956 283 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 TMED9Q9BVK6 235 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 YTHDF1Q9BYJ9 559 aaKnown RBP10.24□□□□□ -0.77
SLIRP-211ENST00000557623 CHST6Q9GZX3 395 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 HEXA-AS1Q9H8Q6 139 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 TCF7L1Q9HCS4 588 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 SF3B6Q9Y3B4 125 aaKnown RBP10.24□□□□□ -0.77
SLIRP-211ENST00000557623 A0A0G2JK05 382 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 DNAJC9-AS1A6NH13 148 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 CLDN34H7C241 214 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 PIN1P1O15428 100 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 CDRT1O95170 752 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 RBP4P02753 201 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 CSN2P05814 226 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 CPEP16870 476 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 OR3A1P47881 315 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 SCN1BQ07699 218 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 ZNF273Q14593 569 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 LIPKQ5VXJ0 399 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 Q6P435 159 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 Q6YL49 198 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 ZNF367Q7RTV3 350 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 LINC00596Q86U02 117 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 PDZD9Q8IXQ8 264 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 JAGN1Q8N5M9 183 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 PHYHIPQ92561 330 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 NR1H4Q96RI1 486 aaPredicted RBP10.23□□□□□ -0.77
SLIRP-211ENST00000557623 MGLLQ99685 303 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 ESM1Q9NQ30 184 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 FAM96BQ9Y3D0 163 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 SOX21Q9Y651 276 aaPredicted RBP10.23□□□□□ -0.77
SLIRP-211ENST00000557623 LINC00312Q9Y6C7 94 aa10.23□□□□□ -0.77
SLIRP-211ENST00000557623 ELOA3CA0A087WX78 387 aaPredicted RBP10.22□□□□□ -0.77
SLIRP-211ENST00000557623 MDFIC2A0A1B0GVS7 189 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 MAGEA13PA6NCF6 341 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 C17orf98A8MV24 154 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 SLC33A1O00400 549 aaPredicted RBP10.22□□□□□ -0.77
SLIRP-211ENST00000557623 NPFFO15130 113 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 ZNF728P0DKX0 622 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 CCL3L1P16619 93 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 SERPINA2P20848 420 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 MAP2K4P45985 399 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 KCNJ3P48549 501 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 P2RX3P56373 397 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 KLRD1Q13241 179 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 HSD17B12Q53GQ0 312 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 NHLRC3Q5JS37 347 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 CEACAM19Q7Z692 300 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 OSR2Q8N2R0 312 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 C11orf42Q8N5U0 333 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.22□□□□□ -0.77
SLIRP-211ENST00000557623 OR10K1Q8NGX5 313 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 MUL1Q969V5 352 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 SLC25A28Q96A46 364 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 FOXRED1Q96CU9 486 aaPredicted RBP10.22□□□□□ -0.77
SLIRP-211ENST00000557623 ZNF714Q96N38 554 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 UQCC2Q9BRT2 126 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 SLITRK2Q9H156 845 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 PPA2Q9H2U2 334 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 ST3GAL6Q9Y274 331 aa10.22□□□□□ -0.77
SLIRP-211ENST00000557623 MRPS28Q9Y2Q9 187 aaKnown RBP10.22□□□□□ -0.77
SLIRP-211ENST00000557623 UBE2J1Q9Y385 318 aaPredicted RBP10.22□□□□□ -0.77
SLIRP-211ENST00000557623 KIAA2026Q5HYC2 2103 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 TRGV10A0A0A0MS01 117 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 A0A0U1RQK1 487 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 HOXA3O43365 443 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-211ENST00000557623 SC5DO75845 299 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 RNASE1P07998 156 aaKnown RBP10.21□□□□□ -0.77
SLIRP-211ENST00000557623 FBP1P09467 338 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 GTF2F2P13984 249 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 SRMP19623 302 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 DLX1P56177 255 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 DLX6P56179 175 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 RBM11P57052 281 aaKnown RBP10.21□□□□□ -0.77
SLIRP-211ENST00000557623 ACTG1P63261 375 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 SLC9A3R2Q15599 337 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 MPV17LQ2QL34 196 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 PIGYQ3MUY2 71 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 SLC22A6Q4U2R8 563 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 MIDNQ504T8 468 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 PAN3Q58A45 887 aaKnown RBP10.21□□□□□ -0.77
SLIRP-211ENST00000557623 KRBOX4Q5JUW0 171 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 GLT8D1Q68CQ7 371 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 AWAT2Q6E213 333 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 TRAPPC6BQ86SZ2 158 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 LDLRAD3Q86YD5 345 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 TMEM86BQ8N661 226 aa10.21□□□□□ -0.77
SLIRP-211ENST00000557623 TPRX1Q8N7U7 411 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms