RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 CLDN12P56749 244 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 OR10A3P58181 314 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 RPL23P62829 140 aaKnown RBP2.15□□□□□ -2.07
TRAV28-201ENST00000557548 GUSBP1Q15486 140 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 SNRNP35Q16560 246 aaKnown RBP2.15□□□□□ -2.07
TRAV28-201ENST00000557548 TCEAL5Q5H9L2 206 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 TMEM255AQ5JRV8 349 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 TEX30Q5JUR7 227 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 SAXO2Q658L1 398 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 DHRS4L2Q6PKH6 230 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 FAM19A1Q7Z5A9 133 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF429Q86V71 674 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 C10orf107Q8IVU9 208 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 OR6V1Q8N148 313 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 C12orf29Q8N999 325 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 UBAC2Q8NBM4 344 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 TMEM35BQ8NCS4 154 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 PIFOQ8TCI5 191 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 ABHD3Q8WU67 409 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 RASSF5Q8WWW0 418 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 TCEAL3Q969E4 200 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 BORCS5Q969J3 196 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 RERGQ96A58 199 aaPredicted RBP2.15□□□□□ -2.07
TRAV28-201ENST00000557548 TM4SF18Q96CE8 201 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 BMFQ96LC9 184 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF488Q96MN9 340 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 RDH12Q96NR8 316 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 TIMM17AQ99595 171 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 HOPXQ9BPY8 73 aaPredicted RBP2.15□□□□□ -2.07
TRAV28-201ENST00000557548 PDCD1LG2Q9BQ51 273 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 TMEM109Q9BVC6 243 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 CDCA4Q9BXL8 241 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 PCBD2Q9H0N5 130 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF442Q9H7R0 627 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 EXOSC4Q9NPD3 245 aaKnown RBP2.15□□□□□ -2.07
TRAV28-201ENST00000557548 RBFOX1Q9NWB1 397 aaKnown RBP2.15□□□□□ -2.07
TRAV28-201ENST00000557548 DDIT4Q9NX09 232 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 GLTPQ9NZD2 209 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 SMPXQ9UHP9 88 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 VAX2Q9UIW0 290 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF391Q9UJN7 358 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 NDRG2Q9UN36 371 aaKnown RBP2.15□□□□□ -2.07
TRAV28-201ENST00000557548 SNX10Q9Y5X0 201 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 ARHGEF12Q9NZN5 1544 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 PTPRGP23470 1445 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 YEATS2Q9ULM3 1422 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 SAMD9LQ8IVG5 1584 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 CFAP74Q9C0B2 1584 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 INO80Q9ULG1 1556 aaPredicted RBP2.15□□□□□ -2.07
TRAV28-201ENST00000557548 RAPGEF2Q9Y4G8 1499 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 SCN2AQ99250 2005 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 IGLV11-55A0A075B6I3 123 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 IGHV3-66A0A0C4DH42 116 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 IGHV3-64DA0A0J9YX35 117 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 TINCRA0A1B0GVN0 87 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 DISC1C4P0D8 188 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 C11orf94C9JXX5 98 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 H0Y9J4 135 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 DNASE2O00115 360 aaPredicted RBP2.14□□□□□ -2.07
TRAV28-201ENST00000557548 CDIPTO14735 213 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF861PO60384 105 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 UGT2B11O75310 529 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 RP2O75695 350 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 UPK1BO75841 260 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 OR2B3O76000 313 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 CNIH1O95406 144 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 SLC25A27O95847 323 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 IGKV3-15P01624 115 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 GUSBP08236 651 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 GTF2F2P13984 249 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF19P17023 458 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 RPS12P25398 132 aaKnown RBP2.14□□□□□ -2.07
TRAV28-201ENST00000557548 PAX6P26367 422 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 CRABP1P29762 137 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 SULT1A1P50225 295 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 SULT1A2P50226 295 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 PPOXP50336 477 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 LHX2P50458 406 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 AQP5P55064 265 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 OR12D2P58182 307 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 ARG2P78540 354 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 IL5RAQ01344 420 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 FLI1Q01543 452 aaPredicted RBP2.14□□□□□ -2.07
TRAV28-201ENST00000557548 PRSS8Q16651 343 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 NDUFA5Q16718 116 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 BRMS1LQ5PSV4 323 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 RSBN1Q5VWQ0 802 aaPredicted RBP2.14□□□□□ -2.07
TRAV28-201ENST00000557548 CST9Q5W186 159 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 STEAP4Q687X5 459 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 KDM4DQ6B0I6 523 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 SPINK14Q6IE38 97 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 SLC36A1Q7Z2H8 476 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 DPPA2Q7Z7J5 298 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 NIT1Q86X76 327 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 BLIDQ8IZY5 108 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 SLC34A3Q8N130 599 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 OR10X1Q8NGY0 326 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 OR6K3Q8NGY3 331 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 COQ8AQ8NI60 647 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 RXFP4Q8TDU9 374 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms