RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 CES1P1Q9UKY3 287 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 TRAPPC4Q9Y296 219 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 HYOU1Q9Y4L1 999 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 V9GYY5 206 aaPredicted RBP3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 MED12Q93074 2177 aa3.46□□□□□ -1.85
MTHFD1-216ENST00000557539 NYNRINQ9P2P1 1898 aaKnown RBP3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 A0A0A6YYD5 115 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 H7C2Y5 167 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 BCL2L11O43521 198 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 CALUO43852 315 aaPredicted RBP3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 CDC40O60508 579 aaKnown RBP eCLIP3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 ALOX12BO75342 701 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 BGLAPP02818 100 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 ERGP11308 486 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 IGFBP3P17936 291 aaPredicted RBP3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 FUT3P21217 361 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 WARSP23381 471 aaKnown RBP3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 PFN2P35080 140 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 DRD3P35462 400 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 ZNF138P52744 262 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 STX17P56962 302 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 OR2B6P58173 313 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 C2orf80Q0P641 193 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 PMS2P3Q13401 168 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 TTLL9Q3SXZ7 439 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 THEM4Q5T1C6 240 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 CLEC6AQ6EIG7 209 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 FAHD1Q6P587 224 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 ACP7Q6ZNF0 438 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 GTSCR1Q86UQ5 136 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 RAB43Q86YS6 212 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 CDRT4Q8N9R6 151 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 CYB561A3Q8NBI2 242 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 ACTRT1Q8TDG2 376 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 ZNF418Q8TF45 676 aaPredicted RBP3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 GTF2H4Q92759 462 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 MAGEB18Q96M61 343 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 OSBPL11Q9BXB4 747 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 EDA2RQ9HAV5 297 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 RMND1Q9NWS8 449 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 UVRAGQ9P2Y5 699 aa3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 RPUSD1Q9UJJ7 312 aaKnown RBP3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 RAI1Q7Z5J4 1906 aaPredicted RBP3.46□□□□□ -1.86
MTHFD1-216ENST00000557539 MALRD1Q5VYJ5 2156 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 ANKRD20A5PA0PJZ0 165 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 REM1O75628 298 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 CDK14O94921 469 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 CTDNEP1O95476 244 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 CDKN2BP42772 138 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 PPICP45877 212 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 DNASE1L1P49184 302 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 UBE2E1P51965 193 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 TAS2R39P59534 338 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 RPS23P62266 143 aaKnown RBP3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 VSNL1P62760 191 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 SKP1P63208 163 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 IGLV3-21P80748 117 aaPredicted RBP3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 ST3GAL4Q11206 333 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 DYNC1I2Q13409 638 aaKnown RBP3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 PIGGQ5H8A4 983 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 OR2T5Q6IEZ7 315 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 ZNF544Q6NX49 715 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 DNAJC24Q6P3W2 148 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 P2RY8Q86VZ1 359 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 CYP4Z1Q86W10 505 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 GPD1LQ8N335 351 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 STPG2Q8N412 459 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 LINC00469Q8N7U9 141 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 NPBQ8NG41 125 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 OR10W1Q8NGF6 305 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 OR2T29Q8NH02 315 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 CREB3L1Q96BA8 519 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 UBE2E2Q96LR5 201 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 ZNF75AQ96N20 296 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 CIB1Q99828 191 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 TIMM29Q9BSF4 260 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 MED10Q9BTT4 135 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 YTHDF1Q9BYJ9 559 aaKnown RBP3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 SDHAF2Q9NX18 166 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 UBAP1Q9NZ09 502 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 OR51B2Q9Y5P1 312 aa3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 TSSC4Q9Y5U2 329 aaPredicted RBP3.45□□□□□ -1.86
MTHFD1-216ENST00000557539 ALMS1Q8TCU4 4167 aa3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 DSCAMO60469 2012 aa3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 DYNC1H1Q14204 4646 aaKnown RBP3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 TRAV17A0A0B4J275 112 aa3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 A0A0B4J2E0 115 aa3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 RNASEK-C17orf49H0YIS7 233 aa3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 hCG_2039718K7EN88 272 aa3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 COCHO43405 550 aa3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 SCN2BO60939 215 aa3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 E2F6O75461 281 aa3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 DEXIO95424 95 aa3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 FADS2O95864 444 aaKnown RBP3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 SYT1P21579 422 aa3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 ZBTB25P24278 435 aa3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 GNRHRP30968 328 aa3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 RBM34P42696 430 aaKnown RBP3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 CACNG7P62955 275 aa3.44□□□□□ -1.86
MTHFD1-216ENST00000557539 RPL18AQ02543 176 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms