RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 GFOD2Q3B7J2 385 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 ZFP69Q49AA0 526 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 AWAT2Q6E213 333 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 OR2T2Q6IF00 324 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 ANGPTL5Q86XS5 388 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 KIR3DL3Q8N743 410 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 TMEM229BQ8NBD8 167 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 OR2Z1Q8NG97 314 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 OR5L1Q8NGL2 311 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 SGK3Q96BR1 496 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 SEH1LQ96EE3 360 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 ELMOD3Q96FG2 381 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 CHST5Q9GZS9 411 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 C20orf85Q9H1P6 137 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 RGCCQ9H4X1 137 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 ZMAT3Q9HA38 289 aaKnown RBP10.44□□□□□ -0.74
SHMT2-230ENST00000557427 NEK6Q9HC98 313 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.44□□□□□ -0.74
SHMT2-230ENST00000557427 ING3Q9NXR8 418 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 ZDHHC8Q9ULC8 765 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 MRPS28Q9Y2Q9 187 aaKnown RBP10.44□□□□□ -0.74
SHMT2-230ENST00000557427 EPPK1P58107 5090 aaKnown RBP10.43□□□□□ -0.74
SHMT2-230ENST00000557427 IGKV1-9A0A0C4DH69 117 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 M0QZ24 198 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 RAB27BO00194 218 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 PEX14O75381 377 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 NDUFB6O95139 128 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 LCATP04180 440 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 CHRM2P08172 466 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 MELTFP08582 738 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 HCKP08631 526 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 AKAIN1P0CW23 69 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 TUBG1P23258 451 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 MECP2P51608 486 aaKnown RBP10.43□□□□□ -0.74
SHMT2-230ENST00000557427 PRSS12P56730 875 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 TNFAIP6P98066 277 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-230ENST00000557427 GUCA2AQ02747 115 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 CBX3Q13185 183 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 KCNJ8Q15842 424 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 SNAI3Q3KNW1 292 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 ZNF260Q3ZCT1 412 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 KLF17Q5JT82 389 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-230ENST00000557427 FAM209AQ5JX71 171 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 CD276Q5ZPR3 534 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 SFRP4Q6FHJ7 346 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-230ENST00000557427 OR10K2Q6IF99 312 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 Q6ZR03 302 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 PNLDC1Q8NA58 520 aaKnown RBP10.43□□□□□ -0.74
SHMT2-230ENST00000557427 KCNG3Q8TAE7 436 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 AQP3Q92482 292 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 RAB1CQ92928 201 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 ITFG2Q969R8 447 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 APOBEC3DQ96AK3 386 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-230ENST00000557427 RANGRFQ9HD47 186 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-230ENST00000557427 TUBG2Q9NRH3 451 aa10.43□□□□□ -0.74
SHMT2-230ENST00000557427 BIRC6Q9NR09 4857 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 CLDN34H7C241 214 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 XRCC2O43543 280 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 KNG1P01042 644 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 RAC2P15153 192 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 KITLGP21583 273 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 TNFSF4P23510 183 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 TAS2R19P59542 299 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 BEAN1Q3B7T3 259 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 MOGAT2Q3SYC2 334 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 GLIPR1L1Q6UWM5 242 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 OR4C16Q8NGL9 310 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 GIMAP1Q8WWP7 306 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 TIMD4Q96H15 378 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 ZNF486Q96H40 463 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-230ENST00000557427 MED30Q96HR3 178 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 REEP6Q96HR9 211 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 DIRC2Q96SL1 478 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 MED28Q9H204 178 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 OR51J1Q9H342 316 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 MCUBQ9NWR8 336 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 PIGLQ9Y2B2 252 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 WIPI2Q9Y4P8 454 aa10.42□□□□□ -0.74
SHMT2-230ENST00000557427 SOX21Q9Y651 276 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-230ENST00000557427 IGHV3-64DA0A0J9YX35 117 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 TSPAN15O95858 294 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 IGHV2-5P01817 119 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 IL5P05113 134 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 GTF2F2P13984 249 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 FAHP16930 419 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 RCVRNP35243 200 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 OR3A4PP47883 348 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 CD83Q01151 205 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 RIPPLY1Q0D2K3 151 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 MAB21L1Q13394 359 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 RBMS2Q15434 407 aaKnown RBP10.41□□□□□ -0.74
SHMT2-230ENST00000557427 KISS1Q15726 138 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 UBE2V2Q15819 145 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 ZBTB37Q5TC79 503 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 METTL11BQ5VVY1 283 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 STEAP1BQ6NZ63 245 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 C17orf107Q6ZR85 190 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 Q6ZTK2 550 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 NOXA1Q86UR1 476 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 BHLHE23Q8NDY6 225 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms