RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 SOX21Q9Y651 276 aaPredicted RBP10.23□□□□□ -0.77
SLIRP-209ENST00000557342 LINC00312Q9Y6C7 94 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 MDFIC2A0A1B0GVS7 189 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 MAGEA13PA6NCF6 341 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 C17orf98A8MV24 154 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 SLC33A1O00400 549 aaPredicted RBP10.22□□□□□ -0.77
SLIRP-209ENST00000557342 NPFFO15130 113 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 ZNF728P0DKX0 622 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 CCL3L1P16619 93 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 SERPINA2P20848 420 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 MAP2K4P45985 399 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 KCNJ3P48549 501 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 P2RX3P56373 397 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 KLRD1Q13241 179 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 HSD17B12Q53GQ0 312 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 NHLRC3Q5JS37 347 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 CEACAM19Q7Z692 300 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 OSR2Q8N2R0 312 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 SVOPQ8N4V2 548 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 C11orf42Q8N5U0 333 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.22□□□□□ -0.77
SLIRP-209ENST00000557342 OR10K1Q8NGX5 313 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 MUL1Q969V5 352 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 SLC25A28Q96A46 364 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 FOXRED1Q96CU9 486 aaPredicted RBP10.22□□□□□ -0.77
SLIRP-209ENST00000557342 ZNF714Q96N38 554 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 UQCC2Q9BRT2 126 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 SLITRK2Q9H156 845 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 PPA2Q9H2U2 334 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 ST3GAL6Q9Y274 331 aa10.22□□□□□ -0.77
SLIRP-209ENST00000557342 MRPS28Q9Y2Q9 187 aaKnown RBP10.22□□□□□ -0.77
SLIRP-209ENST00000557342 UBE2J1Q9Y385 318 aaPredicted RBP10.22□□□□□ -0.77
SLIRP-209ENST00000557342 KIAA2026Q5HYC2 2103 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 TRGV10A0A0A0MS01 117 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 A0A0U1RQK1 487 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 HOXA3O43365 443 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-209ENST00000557342 SC5DO75845 299 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 TNFAIP8O95379 198 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 RNASE1P07998 156 aaKnown RBP10.21□□□□□ -0.77
SLIRP-209ENST00000557342 FBP1P09467 338 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 GTF2F2P13984 249 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 SRMP19623 302 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 DLX1P56177 255 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 DLX6P56179 175 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 RBM11P57052 281 aaKnown RBP10.21□□□□□ -0.77
SLIRP-209ENST00000557342 ACTG1P63261 375 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 SLC9A3R2Q15599 337 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 MPV17LQ2QL34 196 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 PIGYQ3MUY2 71 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 SLC22A6Q4U2R8 563 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 MIDNQ504T8 468 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 PAN3Q58A45 887 aaKnown RBP10.21□□□□□ -0.77
SLIRP-209ENST00000557342 KRBOX4Q5JUW0 171 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 GLT8D1Q68CQ7 371 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 AWAT2Q6E213 333 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 TRAPPC6BQ86SZ2 158 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 LDLRAD3Q86YD5 345 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 PIP4P2Q8N4L2 257 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 TMEM86BQ8N661 226 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 TPRX1Q8N7U7 411 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 MRPS24Q96EL2 167 aaKnown RBP10.21□□□□□ -0.77
SLIRP-209ENST00000557342 NKX3-1Q99801 234 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-209ENST00000557342 GAL3ST2Q9H3Q3 398 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 ZNF696Q9H7X3 374 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 IFT22Q9H7X7 185 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 ACOT13Q9NPJ3 140 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 GHRLQ9UBU3 117 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 POMT1Q9Y6A1 747 aa10.21□□□□□ -0.77
SLIRP-209ENST00000557342 A0A1W2PRD5 423 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 A0A1W2PRF3 423 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 A0A1W2PRM7 423 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 MEIOCA2RUB1 952 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 ARL6IP5O75915 188 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 PAHP00439 452 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 MELTFP08582 738 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 UCHL1P09936 223 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 GABRA5P31644 462 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 SAA4P35542 130 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 PRB3Q04118 309 aaPredicted RBP10.2□□□□□ -0.78
SLIRP-209ENST00000557342 AESQ08117 197 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 INSL4Q14641 139 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 KCTD21Q4G0X4 260 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 HCP5Q6MZN7 132 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 GLIPR1L1Q6UWM5 242 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 OR13D1Q8NGV5 346 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 SSMEM1Q8WWF3 244 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 CORO2AQ92828 525 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 TMEM203Q969S6 136 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 DNHD1Q96M86 4753 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 C1orf147Q96MC9 270 aaPredicted RBP10.2□□□□□ -0.78
SLIRP-209ENST00000557342 DUX5Q96PT3 197 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 BARHL1Q9BZE3 327 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 DPAGT1Q9H3H5 408 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 NCOR1P1Q9H4R4 102 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 TAS2R3Q9NYW6 316 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 OR6C3Q9NZP0 311 aa10.2□□□□□ -0.78
SLIRP-209ENST00000557342 TRAV24A0A0B4J272 114 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 ODAMA1E959 279 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 BTBD17A6NE02 478 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 H3BUI4 141 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms