RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 RPS27AP62979 156 aaKnown RBP2.76□□□□□ -1.97
CHD8-212ENST00000557329 CD47Q08722 323 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 OR8G1Q15617 311 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 MPPED2Q15777 294 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 SSX2Q16385 188 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 PCK2Q16822 640 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 ABCA11PQ4W5N1 156 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 LRRC10Q5BKY1 277 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 OR4F3Q6IEY1 312 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 C10orf99Q6UWK7 81 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 NET1Q7Z628 596 aaPredicted RBP2.76□□□□□ -1.97
CHD8-212ENST00000557329 SLC22A9Q8IVM8 553 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 SLC30A8Q8IWU4 369 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 KRTCAP2Q8N6L1 136 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 FAM71CQ8NEG0 241 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 OR52H1Q8NGJ2 320 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 OR52P1PQ8NH57 321 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 SFXN5Q8TD22 340 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 RPS4Y2Q8TD47 263 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 SPRYD4Q8WW59 207 aaPredicted RBP2.76□□□□□ -1.97
CHD8-212ENST00000557329 MCHR2Q969V1 340 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 CCDC115Q96NT0 180 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 S1PR3Q99500 378 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 CCT7Q99832 543 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 RERGLQ9H628 205 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 C1orf123Q9NWV4 160 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 MARCOQ9UEW3 520 aaPredicted RBP2.76□□□□□ -1.97
CHD8-212ENST00000557329 PITPNC1Q9UKF7 332 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 AURKCQ9UQB9 309 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 TIMM10BQ9Y5J6 103 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 HILPDAQ9Y5L2 63 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 N6AMT1Q9Y5N5 214 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 A0A087X0K7 114 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 TEX48A0A1B0GUV7 120 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 A0A1W2PRG6 482 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 FAM168BA1KXE4 195 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 PSMB11A5LHX3 300 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 LGALS8O00214 317 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 SLC33A1O00400 549 aaPredicted RBP2.75□□□□□ -1.97
CHD8-212ENST00000557329 PLPP3O14495 311 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 NDUFA2O43678 99 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 ARG1P05089 322 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 DUX4L4P0CJ87 422 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 MYL2P10916 166 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 CD24P25063 80 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 LAP3P28838 519 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 PHBP35232 272 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 SERPINB5P36952 375 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 MYCNOSP40205 109 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 GABRA2P47869 451 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 SNU13P55769 128 aaKnown RBP2.75□□□□□ -1.97
CHD8-212ENST00000557329 OR12D2P58182 307 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 PCBD1P61457 104 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 ELF3P78545 371 aaPredicted RBP2.75□□□□□ -1.97
CHD8-212ENST00000557329 LRRC74AQ0VAA2 488 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 CYLC2Q14093 348 aaPredicted RBP2.75□□□□□ -1.97
CHD8-212ENST00000557329 SELPLGQ14242 412 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 KIAA0040Q15053 153 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 RBMY1FQ15415 496 aaKnown RBP2.75□□□□□ -1.97
CHD8-212ENST00000557329 SPHARQ15513 63 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 MICBQ29980 383 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 DEFB136Q30KP8 78 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 TIMM50Q3ZCQ8 353 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 LIN52Q52LA3 116 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 BEND6Q5SZJ8 279 aaPredicted RBP2.75□□□□□ -1.97
CHD8-212ENST00000557329 NCR3LG1Q68D85 454 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 ZNF836Q6ZNA1 936 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 ZNF621Q6ZSS3 439 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 ZNF826PQ6ZT77 177 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 SLC36A1Q7Z2H8 476 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 LHFPL4Q7Z7J7 247 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 LRRC34Q8IZ02 419 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 FAM216BQ8N7L0 139 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 FNDC5Q8NAU1 212 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 SMYD1Q8NB12 490 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 OR8G5Q8NG78 346 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 OR5L1Q8NGL2 311 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 OR9Q1Q8NGQ5 310 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 OR6X1Q8NH79 312 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 ADAMTS16Q8TE57 1224 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 SLC7A6Q92536 515 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 TMEM54Q969K7 222 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 RFT1Q96AA3 541 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 HAVCR1Q96D42 359 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 DUS3LQ96G46 650 aaKnown RBP2.75□□□□□ -1.97
CHD8-212ENST00000557329 SLC25A44Q96H78 314 aaPredicted RBP2.75□□□□□ -1.97
CHD8-212ENST00000557329 PPP1R36Q96LQ0 422 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 RAB40CQ96S21 281 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 ZNF607Q96SK3 696 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 ECSITQ9BQ95 431 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 SLC35A5Q9BS91 424 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 ST6GALNAC5Q9BVH7 336 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 TMED9Q9BVK6 235 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 HCAR1Q9BXC0 346 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 OR2H1Q9GZK4 316 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 METTL8Q9H825 291 aaKnown RBP2.75□□□□□ -1.97
CHD8-212ENST00000557329 TUBA4BQ9H853 241 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 SIAEQ9HAT2 523 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 TMEM27Q9HBJ8 222 aa2.75□□□□□ -1.97
CHD8-212ENST00000557329 POLE3Q9NRF9 147 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms