RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 SOX8P57073 446 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 GUCA2BQ16661 112 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 DPPA2Q7Z7J5 298 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 NUP210LQ5VU65 1888 aa13.24□□□□□ -0.29
TMEM55B-207ENST00000557041 FIGNL2A6NMB9 653 aa13.24□□□□□ -0.29
TMEM55B-207ENST00000557041 ETV2O00321 342 aaPredicted RBP13.24□□□□□ -0.29
TMEM55B-207ENST00000557041 DEGS1O15121 323 aa13.24□□□□□ -0.29
TMEM55B-207ENST00000557041 TUSC2O75896 110 aa13.24□□□□□ -0.29
TMEM55B-207ENST00000557041 NHLH2Q02577 135 aa13.24□□□□□ -0.29
TMEM55B-207ENST00000557041 TRIP6Q15654 476 aaKnown RBP13.24□□□□□ -0.29
TMEM55B-207ENST00000557041 TMEM182Q6ZP80 229 aaPredicted RBP13.24□□□□□ -0.29
TMEM55B-207ENST00000557041 APOBEC3DQ96AK3 386 aaPredicted RBP13.24□□□□□ -0.29
TMEM55B-207ENST00000557041 ZNF318Q5VUA4 2279 aa13.24□□□□□ -0.29
TMEM55B-207ENST00000557041 FAM24AA6NFZ4 105 aa13.24□□□□□ -0.29
TMEM55B-207ENST00000557041 ST8SIA3O43173 380 aa13.24□□□□□ -0.29
TMEM55B-207ENST00000557041 DKK1O94907 266 aa13.24□□□□□ -0.29
TMEM55B-207ENST00000557041 FHITP49789 147 aa13.24□□□□□ -0.29
TMEM55B-207ENST00000557041 ZPBPQ9BS86 351 aa13.24□□□□□ -0.29
TMEM55B-207ENST00000557041 NMES1Q9C002 83 aa13.24□□□□□ -0.29
TMEM55B-207ENST00000557041 SLC25A4P12235 298 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 ACP1P24666 158 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 SRSF3P84103 164 aaKnown RBP13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 MRPL49Q13405 166 aaKnown RBP13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 ZNF703Q9H7S9 590 aaPredicted RBP13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 NAA60Q9H7X0 242 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 RPS10P5Q9NQ39 176 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 ERRFI1Q9UJM3 462 aaPredicted RBP13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 OSGIN2Q9Y236 505 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 PPYP01298 95 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 IL2RAP01589 272 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 SP1P08047 785 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 CCL1P22362 96 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 CHATP28329 748 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 DHODHQ02127 395 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 TGFBR3Q03167 851 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 GTF3C1Q12789 2109 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 DEFB109BQ30KR1 87 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 NSUN5P2Q63ZY6 315 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 ZNF808Q8N4W9 903 aaPredicted RBP13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 SLC30A7Q8NEW0 376 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 OR52M1Q8NGK5 317 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 FAM234AQ9H0X4 552 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 CCL28Q9NRJ3 127 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 RCL1Q9Y2P8 373 aaKnown RBP13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 ABCD4O14678 606 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 CDIPTO14735 213 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 CYTIPO60759 359 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 EIF3GO75821 320 aaKnown RBP eCLIP13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 NKX2-1P43699 371 aaPredicted RBP13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 RBM11P57052 281 aaKnown RBP13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 KRBOX4Q5JUW0 171 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 LYPD6Q86Y78 171 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 GAPTQ8N292 157 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 OR8U1Q8NH10 309 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 C2CD4CQ8TF44 421 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 CNTNAP3Q9BZ76 1288 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 RHOFQ9HBH0 211 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 FANCFQ9NPI8 374 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 EDARQ9UNE0 448 aa13.23□□□□□ -0.29
TMEM55B-207ENST00000557041 hCG_38984A0A1B0GV85 526 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 OR13C7P0DN81 318 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 CRYGSP22914 178 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 ERVS71-1P61550 626 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 HOXA4Q00056 320 aaPredicted RBP13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 EDDM3AQ14507 147 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 MDP1Q86V88 176 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 SVBPQ8N300 66 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 LILRA1O75019 489 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 SLC35G3Q8N808 338 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 RFESDQ8TAC1 157 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 OR2J1Q9GZK6 312 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 CRIM1Q9NZV1 1036 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 NKX2-6A6NCS4 301 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 TUBAL3A6NHL2 446 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 CTSDP07339 412 aaPredicted RBP13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 TAGLNQ01995 201 aaKnown RBP13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 FOXO1Q12778 655 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 ZNF529Q6P280 563 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 ZFP62Q8NB50 900 aaPredicted RBP13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 OR1J1Q8NGS3 322 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 OR10J5Q8NHC4 309 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 NANOS1Q8WY41 292 aaKnown RBP13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 ERGIC1Q969X5 290 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 KIRREL1Q96J84 757 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 AKR1E2Q96JD6 320 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 DNTTIP1Q9H147 329 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 LIME1Q9H400 295 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 AMDHD2Q9Y303 409 aa13.22□□□□□ -0.29
TMEM55B-207ENST00000557041 ADAM20O43506 726 aa13.21□□□□□ -0.29
TMEM55B-207ENST00000557041 HSD17B13Q7Z5P4 300 aaPredicted RBP13.21□□□□□ -0.29
TMEM55B-207ENST00000557041 FAM89BQ8N5H3 189 aa13.21□□□□□ -0.29
TMEM55B-207ENST00000557041 SUCNR1Q9BXA5 334 aa13.21□□□□□ -0.29
TMEM55B-207ENST00000557041 REG4Q9BYZ8 158 aa13.21□□□□□ -0.29
TMEM55B-207ENST00000557041 SHARPINQ9H0F6 387 aa13.21□□□□□ -0.29
TMEM55B-207ENST00000557041 RGCCQ9H4X1 137 aa13.21□□□□□ -0.29
TMEM55B-207ENST00000557041 RHBDL1O75783 438 aa13.21□□□□□ -0.29
TMEM55B-207ENST00000557041 ACTL6AO96019 429 aa13.21□□□□□ -0.29
TMEM55B-207ENST00000557041 IAPPP10997 89 aa13.21□□□□□ -0.29
TMEM55B-207ENST00000557041 HOXA6P31267 233 aa13.21□□□□□ -0.29
TMEM55B-207ENST00000557041 CEBPDP49716 269 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms