RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 SDSLQ96GA7 329 aa8.04□□□□□ -1.12
HNRNPC-228ENST00000557033 GAFA1Q96PS6 74 aa8.04□□□□□ -1.12
HNRNPC-228ENST00000557033 RBM4BQ9BQ04 359 aaKnown RBP8.04□□□□□ -1.12
HNRNPC-228ENST00000557033 SEMA6AQ9H2E6 1030 aa8.04□□□□□ -1.12
HNRNPC-228ENST00000557033 ONECUT1Q9UBC0 465 aa8.04□□□□□ -1.12
HNRNPC-228ENST00000557033 DUX4Q9UBX2 424 aa8.04□□□□□ -1.12
HNRNPC-228ENST00000557033 MRM2Q9UI43 246 aaKnown RBP8.04□□□□□ -1.12
HNRNPC-228ENST00000557033 POLDIP2Q9Y2S7 368 aa8.04□□□□□ -1.12
HNRNPC-228ENST00000557033 KCNK7Q9Y2U2 307 aa8.04□□□□□ -1.12
HNRNPC-228ENST00000557033 IGKV1D-17A0A075B6S4 117 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 A0A1W2PQL4 384 aaPredicted RBP8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 METTL15A6NJ78 407 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 M0R129 80 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 M0R1W7 72 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 MAGEB4O15481 346 aaPredicted RBP8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 OGG1O15527 345 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 EGR2P11161 476 aaPredicted RBP8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 CCL1P22362 96 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 EEF1B2P24534 225 aaKnown RBP8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 IER3P46695 156 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 SOX2P48431 317 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 CDC42P60953 191 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 SLC25A30Q5SVS4 291 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 NCR3LG1Q68D85 454 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 FIP1L1Q6UN15 594 aaKnown RBP8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 HAPLN4Q86UW8 402 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 Q8N7P7 452 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 YIPF7Q8N8F6 280 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 POC1AQ8NBT0 407 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 OR4F5Q8NH21 305 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 H1FXQ92522 213 aaKnown RBP8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 TTTY10Q9BZA0 68 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 DPAGT1Q9H3H5 408 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 ZNF696Q9H7X3 374 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 METTL8Q9H825 291 aaKnown RBP8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 BEX1Q9HBH7 125 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 ZNF222Q9UK12 451 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 SLC22A13Q9Y226 551 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 MAB21L2Q9Y586 359 aa8.03□□□□□ -1.12
HNRNPC-228ENST00000557033 PQLC2LA1A4F0 135 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 RNASEK-C17orf49H0YIS7 233 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 J3QT63 122 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 RPP14O95059 124 aaKnown RBP8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 NDUFA7O95182 113 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 SERPINA3P01011 423 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 FBP1P09467 338 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 PGA5P0DJD9 388 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 MPZP25189 248 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 PRDX2P32119 198 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 HAAOP46952 286 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 UBE2E1P51965 193 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 ACSM1Q08AH1 577 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 CBX3Q13185 183 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 SMIM21Q3B7S5 101 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 MEDAGQ5VYS4 303 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 ZFP1Q6P2D0 407 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 TMEM65Q6PI78 240 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 ACP7Q6ZNF0 438 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 PLEKHG7Q6ZR37 379 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 SSX6Q7RTT6 188 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 NOXA1Q86UR1 476 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 CATSPERDQ86XM0 798 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 ZNF561Q8N587 486 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 ZNRF1Q8ND25 227 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 OR10H4Q8NGA5 316 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 OR5D13Q8NGL4 314 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 RORBQ92753 470 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 TNFRSF14Q92956 283 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 EME1Q96AY2 570 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 C10orf35Q96D05 121 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 CHIAQ9BZP6 476 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 PKIBQ9C010 78 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 RIBC2Q9H4K1 309 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 USE1Q9NZ43 259 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 C1RLQ9NZP8 487 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 SLC7A11Q9UPY5 501 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 ORC6Q9Y5N6 252 aa8.02□□□□□ -1.13
HNRNPC-228ENST00000557033 SCO2A0A1W2PP80 73 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 ANKRD61A6NGH8 418 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 RFPL4AA6NLU0 287 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 SNTNA6NMZ2 147 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 NPIPB6E9PJ23 425 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 RFPL4AL1F8VTS6 287 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 SLC1A7O00341 560 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 NPFFO15130 113 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 SYT7O43581 403 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 ALPLP05186 524 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 MDKP21741 143 aaPredicted RBP8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 FUT6P51993 359 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 RAG2P55895 527 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 IL24Q13007 206 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 KPNB1Q14974 876 aaKnown RBP8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 DMRTC1Q5HYR2 192 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 GDPGP1Q6ZNW5 385 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 PDZD9Q8IXQ8 264 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 TMEM185AQ8NFB2 350 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 WIPF2Q8TF74 440 aaPredicted RBP8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 PYDC1Q8WXC3 89 aa8.01□□□□□ -1.13
HNRNPC-228ENST00000557033 TBX5Q99593 518 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms