RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 RBP4P02753 201 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 CSN2P05814 226 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 UCHL1P09936 223 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 GTF2F2P13984 249 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 CCL3L1P16619 93 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 SERPINA2P20848 420 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 OR3A1P47881 315 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 GP2P55259 537 aaKnown RBP8.75□□□□□ -1.01
LINC00239-201ENST00000556973 EDDM3AQ14507 147 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 ZNF273Q14593 569 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 DEFB112Q30KQ8 113 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 HSD17B12Q53GQ0 312 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 NHLRC3Q5JS37 347 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 LINC00596Q86U02 117 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 PDZD9Q8IXQ8 264 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 SPARTQ8N0X7 666 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 PIP4P2Q8N4L2 257 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 OR10K1Q8NGX5 313 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 FAM216AQ8WUB2 273 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 CORO2AQ92828 525 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 MUL1Q969V5 352 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 MRPS24Q96EL2 167 aaKnown RBP8.75□□□□□ -1.01
LINC00239-201ENST00000556973 ZNF714Q96N38 554 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 NKX3-1Q99801 234 aaPredicted RBP8.75□□□□□ -1.01
LINC00239-201ENST00000556973 SLITRK2Q9H156 845 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 ZMAT3Q9HA38 289 aaKnown RBP8.75□□□□□ -1.01
LINC00239-201ENST00000556973 ESM1Q9NQ30 184 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 GHRLQ9UBU3 117 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 MRPS28Q9Y2Q9 187 aaKnown RBP8.75□□□□□ -1.01
LINC00239-201ENST00000556973 UBE2J1Q9Y385 318 aaPredicted RBP8.75□□□□□ -1.01
LINC00239-201ENST00000556973 LINC00312Q9Y6C7 94 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 CLDN34H7C241 214 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 RRP9O43818 475 aaKnown RBP8.74□□□□□ -1.01
LINC00239-201ENST00000556973 ARL6IP5O75915 188 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 ZNF728P0DKX0 622 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 CD37P11049 281 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 GABRA5P31644 462 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 DLX1P56177 255 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 DLX6P56179 175 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 P2RX3P56373 397 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 RBM11P57052 281 aaKnown RBP8.74□□□□□ -1.01
LINC00239-201ENST00000556973 ERVFRD-1P60508 538 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 RPS25P62851 125 aaKnown RBP8.74□□□□□ -1.01
LINC00239-201ENST00000556973 UBA52P62987 128 aaKnown RBP8.74□□□□□ -1.01
LINC00239-201ENST00000556973 AESQ08117 197 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 KLRD1Q13241 179 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 MPV17LQ2QL34 196 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 PIGYQ3MUY2 71 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 KRBOX4Q5JUW0 171 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 FAM27D1Q5T7N8 215 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 GLT8D1Q68CQ7 371 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 AWAT2Q6E213 333 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 GLIPR1L1Q6UWM5 242 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 TMEM91Q6ZNR0 172 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 LRRTM1Q86UE6 522 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 TPRX1Q8N7U7 411 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 SPATA3Q8NHX4 192 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 SLC25A28Q96A46 364 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 C19orf24Q9BVV8 132 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 BARHL1Q9BZE3 327 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 PPIL3Q9H2H8 161 aaKnown RBP8.74□□□□□ -1.01
LINC00239-201ENST00000556973 PPA2Q9H2U2 334 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 NCOR1P1Q9H4R4 102 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 IFT22Q9H7X7 185 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 FAM96BQ9Y3D0 163 aa8.74□□□□□ -1.01
LINC00239-201ENST00000556973 TRGV10A0A0A0MS01 117 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 TRAV24A0A0B4J272 114 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 A0A0U1RQK1 487 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 MDFIC2A0A1B0GVS7 189 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 DNAJC9-AS1A6NH13 148 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 GEMIN2O14893 280 aaKnown RBP8.73□□□□□ -1.01
LINC00239-201ENST00000556973 IGHV1-8P0DP01 117 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 GLIPR1P48060 266 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 KCNJ3P48549 501 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 FABP5Q01469 135 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 PRB3Q04118 309 aaPredicted RBP8.73□□□□□ -1.01
LINC00239-201ENST00000556973 SLC9A3R2Q15599 337 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 SLC22A6Q4U2R8 563 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 MIDNQ504T8 468 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 PAN3Q58A45 887 aaKnown RBP8.73□□□□□ -1.01
LINC00239-201ENST00000556973 UBE2UQ5VVX9 321 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 HCP5Q6MZN7 132 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 TRAPPC6BQ86SZ2 158 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 TMEM86BQ8N661 226 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 ZNF565Q8N9K5 539 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 OR4D6Q8NGJ1 314 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 OR13D1Q8NGV5 346 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 FCGR1BQ92637 280 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 C1orf147Q96MC9 270 aaPredicted RBP8.73□□□□□ -1.01
LINC00239-201ENST00000556973 GAL3ST2Q9H3Q3 398 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 TAS2R3Q9NYW6 316 aa8.73□□□□□ -1.01
LINC00239-201ENST00000556973 A0A1W2PP11 408 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 A0A1W2PRD5 423 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 A0A1W2PRF3 423 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 A0A1W2PRM7 423 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 MEIOCA2RUB1 952 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 FAM90A10PA6NDY2 464 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 FAM90A18PA6NE21 464 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 FAM90A16PA6NEW6 464 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 FAM90A20PA6NIJ5 464 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms