RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 PPA2Q9H2U2 334 aa18.68■□□□□ 0.58
TDP1-216ENST00000556867 SF3B6Q9Y3B4 125 aaKnown RBP18.68■□□□□ 0.58
TDP1-216ENST00000556867 DEGS1O15121 323 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 DENRO43583 198 aaKnown RBP18.67■□□□□ 0.58
TDP1-216ENST00000556867 HTR3BO95264 441 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 SAA4P35542 130 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 ACTG1P63261 375 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 MLLT11Q13015 90 aaPredicted RBP18.67■□□□□ 0.58
TDP1-216ENST00000556867 INSL4Q14641 139 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 TBCEQ15813 527 aaPredicted RBP18.67■□□□□ 0.58
TDP1-216ENST00000556867 NHLRC3Q5JS37 347 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 LIPKQ5VXJ0 399 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 LDLRAD3Q86YD5 345 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 PNKDQ8N490 385 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 TMEM86BQ8N661 226 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 TPRX1Q8N7U7 411 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 NKAIN3Q8N8D7 197 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 ZNF714Q96N38 554 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 NR1H4Q96RI1 486 aaPredicted RBP18.67■□□□□ 0.58
TDP1-216ENST00000556867 S100A13Q99584 98 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 HEXA-AS1Q9H8Q6 139 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 ING4Q9UNL4 249 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 KIAA2026Q5HYC2 2103 aa18.67■□□□□ 0.58
TDP1-216ENST00000556867 A0A1W2PRD5 423 aa18.66■□□□□ 0.58
TDP1-216ENST00000556867 A0A1W2PRF3 423 aa18.66■□□□□ 0.58
TDP1-216ENST00000556867 A0A1W2PRM7 423 aa18.66■□□□□ 0.58
TDP1-216ENST00000556867 FUOMA2VDF0 154 aa18.66■□□□□ 0.58
TDP1-216ENST00000556867 ZNF780AO75290 641 aaPredicted RBP18.66■□□□□ 0.58
TDP1-216ENST00000556867 SC5DO75845 299 aa18.66■□□□□ 0.58
TDP1-216ENST00000556867 MAS1P04201 325 aa18.66■□□□□ 0.58
TDP1-216ENST00000556867 FBP1P09467 338 aa18.66■□□□□ 0.58
TDP1-216ENST00000556867 MAP2K4P45985 399 aa18.66■□□□□ 0.58
TDP1-216ENST00000556867 GABARAPL2P60520 117 aa18.66■□□□□ 0.58
TDP1-216ENST00000556867 PIGYQ3MUY2 71 aa18.66■□□□□ 0.58
TDP1-216ENST00000556867 MIDNQ504T8 468 aa18.66■□□□□ 0.58
TDP1-216ENST00000556867 LYPD6Q86Y78 171 aa18.66■□□□□ 0.58
TDP1-216ENST00000556867 JAGN1Q8N5M9 183 aa18.66■□□□□ 0.58
TDP1-216ENST00000556867 SSMEM1Q8WWF3 244 aa18.66■□□□□ 0.58
TDP1-216ENST00000556867 FAM96BQ9Y3D0 163 aa18.66■□□□□ 0.58
TDP1-216ENST00000556867 ANK2Q01484 3957 aa18.65■□□□□ 0.58
TDP1-216ENST00000556867 MEX3AA1L020 520 aaKnown RBP18.65■□□□□ 0.58
TDP1-216ENST00000556867 TMEM89A2RUT3 159 aa18.65■□□□□ 0.58
TDP1-216ENST00000556867 CSTBP04080 98 aaKnown RBP18.65■□□□□ 0.58
TDP1-216ENST00000556867 HSMCR30P0CW71 290 aa18.65■□□□□ 0.58
TDP1-216ENST00000556867 GP2P55259 537 aaKnown RBP18.65■□□□□ 0.58
TDP1-216ENST00000556867 RBM11P57052 281 aaKnown RBP18.65■□□□□ 0.58
TDP1-216ENST00000556867 FAM27D1Q5T7N8 215 aa18.65■□□□□ 0.58
TDP1-216ENST00000556867 OSR2Q8N2R0 312 aa18.65■□□□□ 0.58
TDP1-216ENST00000556867 MUL1Q969V5 352 aa18.65■□□□□ 0.58
TDP1-216ENST00000556867 PCDHB16Q9NRJ7 776 aa18.65■□□□□ 0.58
TDP1-216ENST00000556867 UBE2J1Q9Y385 318 aaPredicted RBP18.65■□□□□ 0.58
TDP1-216ENST00000556867 POMT1Q9Y6A1 747 aa18.65■□□□□ 0.58
TDP1-216ENST00000556867 TRAV24A0A0B4J272 114 aa18.64■□□□□ 0.57
TDP1-216ENST00000556867 MEIOCA2RUB1 952 aa18.64■□□□□ 0.57
TDP1-216ENST00000556867 MEGF11A6BM72 1044 aa18.64■□□□□ 0.57
TDP1-216ENST00000556867 CPEP16870 476 aa18.64■□□□□ 0.57
TDP1-216ENST00000556867 AESQ08117 197 aa18.64■□□□□ 0.57
TDP1-216ENST00000556867 GPR176Q14439 515 aa18.64■□□□□ 0.57
TDP1-216ENST00000556867 ZNF782Q6ZMW2 699 aaPredicted RBP18.64■□□□□ 0.57
TDP1-216ENST00000556867 PHYHIPQ92561 330 aa18.64■□□□□ 0.57
TDP1-216ENST00000556867 COQ2Q96H96 371 aa18.64■□□□□ 0.57
TDP1-216ENST00000556867 MGLLQ99685 303 aa18.64■□□□□ 0.57
TDP1-216ENST00000556867 IFT22Q9H7X7 185 aa18.64■□□□□ 0.57
TDP1-216ENST00000556867 ZNRD1Q9P1U0 126 aa18.64■□□□□ 0.57
TDP1-216ENST00000556867 ST3GAL6Q9Y274 331 aa18.64■□□□□ 0.57
TDP1-216ENST00000556867 MRPS28Q9Y2Q9 187 aaKnown RBP18.64■□□□□ 0.57
TDP1-216ENST00000556867 MRPS14O60783 128 aaKnown RBP18.63■□□□□ 0.57
TDP1-216ENST00000556867 UCHL1P09936 223 aa18.63■□□□□ 0.57
TDP1-216ENST00000556867 IGHV1-8P0DP01 117 aa18.63■□□□□ 0.57
TDP1-216ENST00000556867 SERPINA2P20848 420 aa18.63■□□□□ 0.57
TDP1-216ENST00000556867 PSMA1P25786 263 aaKnown RBP18.63■□□□□ 0.57
TDP1-216ENST00000556867 COMPP49747 757 aaPredicted RBP18.63■□□□□ 0.57
TDP1-216ENST00000556867 ATXN7L3Q14CW9 347 aaPredicted RBP18.63■□□□□ 0.57
TDP1-216ENST00000556867 TRAM1Q15629 374 aa18.63■□□□□ 0.57
TDP1-216ENST00000556867 SLC22A6Q4U2R8 563 aa18.63■□□□□ 0.57
TDP1-216ENST00000556867 PAN3Q58A45 887 aaKnown RBP18.63■□□□□ 0.57
TDP1-216ENST00000556867 C16orf87Q6PH81 154 aa18.63■□□□□ 0.57
TDP1-216ENST00000556867 ZNF367Q7RTV3 350 aa18.63■□□□□ 0.57
TDP1-216ENST00000556867 CEACAM19Q7Z692 300 aa18.63■□□□□ 0.57
TDP1-216ENST00000556867 LINC00596Q86U02 117 aa18.63■□□□□ 0.57
TDP1-216ENST00000556867 CORO2AQ92828 525 aa18.63■□□□□ 0.57
TDP1-216ENST00000556867 GCDHQ92947 438 aaPredicted RBP18.63■□□□□ 0.57
TDP1-216ENST00000556867 UQCC2Q9BRT2 126 aa18.63■□□□□ 0.57
TDP1-216ENST00000556867 TCF7L1Q9HCS4 588 aa18.63■□□□□ 0.57
TDP1-216ENST00000556867 TRGV10A0A0A0MS01 117 aa18.62■□□□□ 0.57
TDP1-216ENST00000556867 ODAMA1E959 279 aa18.62■□□□□ 0.57
TDP1-216ENST00000556867 GTF2F2P13984 249 aa18.62■□□□□ 0.57
TDP1-216ENST00000556867 COX7A1P24310 79 aa18.62■□□□□ 0.57
TDP1-216ENST00000556867 IER3P46695 156 aa18.62■□□□□ 0.57
TDP1-216ENST00000556867 GLIPR1P48060 266 aa18.62■□□□□ 0.57
TDP1-216ENST00000556867 RPS25P62851 125 aaKnown RBP18.62■□□□□ 0.57
TDP1-216ENST00000556867 PAX5Q02548 391 aa18.62■□□□□ 0.57
TDP1-216ENST00000556867 HSD17B12Q53GQ0 312 aa18.62■□□□□ 0.57
TDP1-216ENST00000556867 KRBOX4Q5JUW0 171 aa18.62■□□□□ 0.57
TDP1-216ENST00000556867 GLIPR1L1Q6UWM5 242 aa18.62■□□□□ 0.57
TDP1-216ENST00000556867 TRAPPC6BQ86SZ2 158 aa18.62■□□□□ 0.57
TDP1-216ENST00000556867 LRRTM1Q86UE6 522 aa18.62■□□□□ 0.57
TDP1-216ENST00000556867 OR4D6Q8NGJ1 314 aa18.62■□□□□ 0.57
TDP1-216ENST00000556867 TMEM203Q969S6 136 aa18.62■□□□□ 0.57
TDP1-216ENST00000556867 ACOT13Q9NPJ3 140 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms