RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 FAM172BPA6NC97 362 aa18.11■□□□□ 0.49
ACTN1-220ENST00000556433 DEGS1O15121 323 aa18.11■□□□□ 0.49
ACTN1-220ENST00000556433 XPNPEP2O43895 674 aa18.11■□□□□ 0.49
ACTN1-220ENST00000556433 HCKP08631 526 aa18.11■□□□□ 0.49
ACTN1-220ENST00000556433 CD24P25063 80 aa18.11■□□□□ 0.49
ACTN1-220ENST00000556433 BRS3P32247 399 aa18.11■□□□□ 0.49
ACTN1-220ENST00000556433 GDNFP39905 211 aa18.11■□□□□ 0.49
ACTN1-220ENST00000556433 KRBOX4Q5JUW0 171 aa18.11■□□□□ 0.49
ACTN1-220ENST00000556433 ZFP1Q6P2D0 407 aa18.11■□□□□ 0.49
ACTN1-220ENST00000556433 OR5D14Q8NGL3 314 aa18.11■□□□□ 0.49
ACTN1-220ENST00000556433 OCSTAMPQ9BR26 566 aa18.11■□□□□ 0.49
ACTN1-220ENST00000556433 MYRFQ9Y2G1 1151 aa18.11■□□□□ 0.49
ACTN1-220ENST00000556433 ADARB2-AS1A8MUL3 147 aa18.1■□□□□ 0.49
ACTN1-220ENST00000556433 LEUTXA8MZ59 168 aa18.1■□□□□ 0.49
ACTN1-220ENST00000556433 TOR1AO14656 332 aa18.1■□□□□ 0.49
ACTN1-220ENST00000556433 DBTP11182 482 aaKnown RBP18.1■□□□□ 0.49
ACTN1-220ENST00000556433 GABRB1P18505 474 aa18.1■□□□□ 0.49
ACTN1-220ENST00000556433 OXLD1Q5BKU9 147 aa18.1■□□□□ 0.49
ACTN1-220ENST00000556433 SERPINA12Q8IW75 414 aa18.1■□□□□ 0.49
ACTN1-220ENST00000556433 SYS1Q8N2H4 156 aa18.1■□□□□ 0.49
ACTN1-220ENST00000556433 CHST4Q8NCG5 386 aa18.1■□□□□ 0.49
ACTN1-220ENST00000556433 CAPSLQ8WWF8 208 aa18.1■□□□□ 0.49
ACTN1-220ENST00000556433 AMBNQ9NP70 447 aa18.1■□□□□ 0.49
ACTN1-220ENST00000556433 SLC33A1O00400 549 aaPredicted RBP18.09■□□□□ 0.49
ACTN1-220ENST00000556433 ALX3O95076 343 aa18.09■□□□□ 0.49
ACTN1-220ENST00000556433 ZFPL1O95159 310 aa18.09■□□□□ 0.49
ACTN1-220ENST00000556433 FADS2O95864 444 aaKnown RBP18.09■□□□□ 0.49
ACTN1-220ENST00000556433 IGLV1-47P01700 117 aa18.09■□□□□ 0.49
ACTN1-220ENST00000556433 CSN2P05814 226 aa18.09■□□□□ 0.49
ACTN1-220ENST00000556433 RPSAP08865 295 aaKnown RBP18.09■□□□□ 0.49
ACTN1-220ENST00000556433 PTGFRP43088 359 aa18.09■□□□□ 0.49
ACTN1-220ENST00000556433 KISS1Q15726 138 aa18.09■□□□□ 0.49
ACTN1-220ENST00000556433 C16orf82Q7Z2V1 217 aa18.09■□□□□ 0.49
ACTN1-220ENST00000556433 OR5AU1Q8NGC0 362 aa18.09■□□□□ 0.49
ACTN1-220ENST00000556433 OR4D6Q8NGJ1 314 aa18.09■□□□□ 0.49
ACTN1-220ENST00000556433 COQ2Q96H96 371 aa18.09■□□□□ 0.49
ACTN1-220ENST00000556433 AKR1E2Q96JD6 320 aa18.09■□□□□ 0.49
ACTN1-220ENST00000556433 Q96MT0 163 aa18.09■□□□□ 0.49
ACTN1-220ENST00000556433 LIN7BQ9HAP6 207 aa18.09■□□□□ 0.49
ACTN1-220ENST00000556433 ZNF286AQ9HBT8 521 aa18.09■□□□□ 0.49
ACTN1-220ENST00000556433 TMEM212A6NML5 194 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 E9PI62 339 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 SULT1B1O43704 296 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 MPZL2O60487 215 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 CD34P28906 385 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 ARHGDIBP52566 201 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 PRRX1P54821 245 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 ZP1P60852 638 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 ATXN7L3Q14CW9 347 aaPredicted RBP18.08■□□□□ 0.48
ACTN1-220ENST00000556433 CDK5R1Q15078 307 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 FBLN7Q53RD9 439 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 CENPVQ7Z7K6 275 aaPredicted RBP18.08■□□□□ 0.48
ACTN1-220ENST00000556433 PARP16Q8N5Y8 322 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 OR5AK2Q8NH90 309 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 RHOXF1Q8NHV9 184 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 CREB3L1Q96BA8 519 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 NR1H4Q96RI1 486 aaPredicted RBP18.08■□□□□ 0.48
ACTN1-220ENST00000556433 INPP5EQ9NRR6 644 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 ERVK13-1Q9NX77 482 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 DHDHQ9UQ10 334 aa18.08■□□□□ 0.48
ACTN1-220ENST00000556433 BUB1B-PAK6H3BSN5 160 aa18.07■□□□□ 0.48
ACTN1-220ENST00000556433 CEACAM3P40198 252 aa18.07■□□□□ 0.48
ACTN1-220ENST00000556433 GBX2P52951 348 aaPredicted RBP18.07■□□□□ 0.48
ACTN1-220ENST00000556433 MRPL28Q13084 256 aaKnown RBP18.07■□□□□ 0.48
ACTN1-220ENST00000556433 C17orf58Q2M2W7 97 aa18.07■□□□□ 0.48
ACTN1-220ENST00000556433 ZNF691Q5VV52 312 aa18.07■□□□□ 0.48
ACTN1-220ENST00000556433 PDCD1LG2Q9BQ51 273 aa18.07■□□□□ 0.48
ACTN1-220ENST00000556433 ZNF649Q9BS31 505 aa18.07■□□□□ 0.48
ACTN1-220ENST00000556433 SLC25A33Q9BSK2 321 aa18.07■□□□□ 0.48
ACTN1-220ENST00000556433 OR6C3Q9NZP0 311 aa18.07■□□□□ 0.48
ACTN1-220ENST00000556433 A0A1W2PRX2 142 aa18.06■□□□□ 0.48
ACTN1-220ENST00000556433 ZNF729A6NN14 1252 aaPredicted RBP18.06■□□□□ 0.48
ACTN1-220ENST00000556433 CCDC159P0C7I6 412 aa18.06■□□□□ 0.48
ACTN1-220ENST00000556433 NFYBP25208 207 aa18.06■□□□□ 0.48
ACTN1-220ENST00000556433 MTNR1BP49286 362 aa18.06■□□□□ 0.48
ACTN1-220ENST00000556433 CD83Q01151 205 aa18.06■□□□□ 0.48
ACTN1-220ENST00000556433 RAB40BQ12829 278 aa18.06■□□□□ 0.48
ACTN1-220ENST00000556433 HLA-DRB5Q30154 266 aa18.06■□□□□ 0.48
ACTN1-220ENST00000556433 TPTE2P1Q5T6R2 138 aa18.06■□□□□ 0.48
ACTN1-220ENST00000556433 REC114Q7Z4M0 266 aa18.06■□□□□ 0.48
ACTN1-220ENST00000556433 C10orf67Q8IYJ2 551 aa18.06■□□□□ 0.48
ACTN1-220ENST00000556433 TSEN15Q8WW01 171 aaKnown RBP18.06■□□□□ 0.48
ACTN1-220ENST00000556433 SLC29A1Q99808 456 aa18.06■□□□□ 0.48
ACTN1-220ENST00000556433 C9orf16Q9BUW7 83 aa18.06■□□□□ 0.48
ACTN1-220ENST00000556433 PPIL3Q9H2H8 161 aaKnown RBP18.06■□□□□ 0.48
ACTN1-220ENST00000556433 A0A087X0M5 115 aa18.05■□□□□ 0.48
ACTN1-220ENST00000556433 A0A1B0GX30 115 aa18.05■□□□□ 0.48
ACTN1-220ENST00000556433 H0YJX3 145 aa18.05■□□□□ 0.48
ACTN1-220ENST00000556433 HSPB6O14558 160 aa18.05■□□□□ 0.48
ACTN1-220ENST00000556433 OR2F2O95006 317 aa18.05■□□□□ 0.48
ACTN1-220ENST00000556433 LPLP06858 475 aa18.05■□□□□ 0.48
ACTN1-220ENST00000556433 OR3A4PP47883 348 aa18.05■□□□□ 0.48
ACTN1-220ENST00000556433 RBM39Q14498 530 aaKnown RBP18.05■□□□□ 0.48
ACTN1-220ENST00000556433 ABCA11PQ4W5N1 156 aa18.05■□□□□ 0.48
ACTN1-220ENST00000556433 UTF1Q5T230 341 aa18.05■□□□□ 0.48
ACTN1-220ENST00000556433 LPCAT4Q643R3 524 aa18.05■□□□□ 0.48
ACTN1-220ENST00000556433 SATL1Q86VE3 508 aa18.05■□□□□ 0.48
ACTN1-220ENST00000556433 ZNF565Q8N9K5 539 aa18.05■□□□□ 0.48
ACTN1-220ENST00000556433 OR52I1Q8NGK6 324 aa18.05■□□□□ 0.48
ACTN1-220ENST00000556433 SGCDQ92629 289 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms