RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 MAP2K4P45985 399 aa12.41□□□□□ -0.42
ACTN1-217ENST00000556203 DLX6P56179 175 aa12.41□□□□□ -0.42
ACTN1-217ENST00000556203 P2RX3P56373 397 aa12.41□□□□□ -0.42
ACTN1-217ENST00000556203 PIGYQ3MUY2 71 aa12.41□□□□□ -0.42
ACTN1-217ENST00000556203 ACSM3Q53FZ2 586 aa12.41□□□□□ -0.42
ACTN1-217ENST00000556203 LIPKQ5VXJ0 399 aa12.41□□□□□ -0.42
ACTN1-217ENST00000556203 ZNF782Q6ZMW2 699 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-217ENST00000556203 JAGN1Q8N5M9 183 aa12.41□□□□□ -0.42
ACTN1-217ENST00000556203 GCDHQ92947 438 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-217ENST00000556203 ZNF714Q96N38 554 aa12.41□□□□□ -0.42
ACTN1-217ENST00000556203 Q9H521 79 aa12.41□□□□□ -0.42
ACTN1-217ENST00000556203 IL36GQ9NZH8 169 aa12.41□□□□□ -0.42
ACTN1-217ENST00000556203 COL6A5A8TX70 2615 aa12.41□□□□□ -0.42
ACTN1-217ENST00000556203 MEIOCA2RUB1 952 aa12.4□□□□□ -0.42
ACTN1-217ENST00000556203 HSPB6O14558 160 aa12.4□□□□□ -0.42
ACTN1-217ENST00000556203 CSTBP04080 98 aaKnown RBP12.4□□□□□ -0.42
ACTN1-217ENST00000556203 SERPINA2P20848 420 aa12.4□□□□□ -0.42
ACTN1-217ENST00000556203 ERP29P30040 261 aaKnown RBP12.4□□□□□ -0.42
ACTN1-217ENST00000556203 SAA4P35542 130 aa12.4□□□□□ -0.42
ACTN1-217ENST00000556203 GPR50Q13585 617 aa12.4□□□□□ -0.42
ACTN1-217ENST00000556203 IL13RA2Q14627 380 aa12.4□□□□□ -0.42
ACTN1-217ENST00000556203 FAM27D1Q5T7N8 215 aa12.4□□□□□ -0.42
ACTN1-217ENST00000556203 TRAPPC6BQ86SZ2 158 aa12.4□□□□□ -0.42
ACTN1-217ENST00000556203 Q8NFD4 153 aa12.4□□□□□ -0.42
ACTN1-217ENST00000556203 OR51T1Q8NGJ9 327 aa12.4□□□□□ -0.42
ACTN1-217ENST00000556203 TMEM203Q969S6 136 aa12.4□□□□□ -0.42
ACTN1-217ENST00000556203 MUL1Q969V5 352 aa12.4□□□□□ -0.42
ACTN1-217ENST00000556203 HEXA-AS1Q9H8Q6 139 aa12.4□□□□□ -0.42
ACTN1-217ENST00000556203 ING3Q9NXR8 418 aa12.4□□□□□ -0.42
ACTN1-217ENST00000556203 LINC00312Q9Y6C7 94 aa12.4□□□□□ -0.42
ACTN1-217ENST00000556203 TRAV24A0A0B4J272 114 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 TMEM89A2RUT3 159 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 FUOMA2VDF0 154 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 DENRO43583 198 aaKnown RBP12.39□□□□□ -0.43
ACTN1-217ENST00000556203 ZNF780AO75290 641 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-217ENST00000556203 PAHP00439 452 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 CSN2P05814 226 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 FBP1P09467 338 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 AESQ08117 197 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 MLLT11Q13015 90 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-217ENST00000556203 TPBGQ13641 420 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 ATXN7L3Q14CW9 347 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-217ENST00000556203 SLC22A6Q4U2R8 563 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 KRBOX4Q5JUW0 171 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 C16orf87Q6PH81 154 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 GLIPR1L1Q6UWM5 242 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 UNQ9370/PRO34162Q6UXP9 181 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 CEACAM19Q7Z692 300 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 LDLRAD3Q86YD5 345 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 OSR2Q8N2R0 312 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 TMEM86BQ8N661 226 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 NKAIN3Q8N8D7 197 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 SSMEM1Q8WWF3 244 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 TCF7L1Q9HCS4 588 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 ISYNA1Q9NPH2 558 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 ST3GAL6Q9Y274 331 aa12.39□□□□□ -0.43
ACTN1-217ENST00000556203 MRPS28Q9Y2Q9 187 aaKnown RBP12.39□□□□□ -0.43
ACTN1-217ENST00000556203 TRGV10A0A0A0MS01 117 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 A0A1W2PP11 408 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 RBP4P02753 201 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 IGHV1-8P0DP01 117 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 GTF2F2P13984 249 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 IER3P46695 156 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 GLIPR1P48060 266 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 GP2P55259 537 aaKnown RBP12.38□□□□□ -0.43
ACTN1-217ENST00000556203 RBM11P57052 281 aaKnown RBP12.38□□□□□ -0.43
ACTN1-217ENST00000556203 RPS25P62851 125 aaKnown RBP12.38□□□□□ -0.43
ACTN1-217ENST00000556203 TBCEQ15813 527 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-217ENST00000556203 MIDNQ504T8 468 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 PAN3Q58A45 887 aaKnown RBP12.38□□□□□ -0.43
ACTN1-217ENST00000556203 NHLRC3Q5JS37 347 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 AWAT2Q6E213 333 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 C12orf54Q6X4T0 127 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 CDH26Q8IXH8 852 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 C17orf50Q8WW18 174 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 COQ2Q96H96 371 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 MGLLQ99685 303 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 CHIAQ9BZP6 476 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 PCDHB16Q9NRJ7 776 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 ZNF581Q9P0T4 197 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 UBE2J1Q9Y385 318 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-217ENST00000556203 POMT1Q9Y6A1 747 aa12.38□□□□□ -0.43
ACTN1-217ENST00000556203 ODAMA1E959 279 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 MEGF11A6BM72 1044 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 SC5DO75845 299 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 OR7C1O76099 320 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-217ENST00000556203 IGHV4-59P01825 116 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 HKR1P10072 659 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 CPEP16870 476 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 GABARAPL2P60520 117 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 GPR176Q14439 515 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 HSD17B12Q53GQ0 312 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 ZNF367Q7RTV3 350 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 LRRTM1Q86UE6 522 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 LYPD6Q86Y78 171 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 OR4D6Q8NGJ1 314 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 OR13D1Q8NGV5 346 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 TAF15Q92804 592 aaKnown RBP eCLIP12.37□□□□□ -0.43
ACTN1-217ENST00000556203 UQCC2Q9BRT2 126 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 PPIL3Q9H2H8 161 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms