RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 OR8S1Q8NH09 359 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 ANGPTL6Q8NI99 470 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 TNFAIP8L1Q8WVP5 186 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 FAHD2AQ96GK7 314 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 SAP30LQ9HAJ7 183 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 BARX1Q9HBU1 254 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-213ENST00000555386 TUBG2Q9NRH3 451 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 OPN4Q9UHM6 478 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 MAB21L2Q9Y586 359 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 F8P00451 2351 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 hCG_38984A0A1B0GV85 526 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 MEIS3P1A6NDR6 274 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 TMEM235A6NFC5 223 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 ANKRD30BLA7E2S9 258 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 L7N2F9 121 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 OR4E1P0C645 316 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 TNFSF4P23510 183 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 COL8A2P25067 703 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 OR3A3P47888 321 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 SRSF4Q08170 494 aaKnown RBP8.34□□□□□ -1.07
PSEN1-213ENST00000555386 OPCMLQ14982 345 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 OR8G1Q15617 311 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 GRK1Q15835 563 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 PNLIPRP3Q17RR3 467 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 MOGAT2Q3SYC2 334 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 CDNFQ49AH0 187 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 C4orf46Q504U0 113 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 ACTBL2Q562R1 376 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 RNASE10Q5GAN6 216 aaKnown RBP8.34□□□□□ -1.07
PSEN1-213ENST00000555386 OR10K2Q6IF99 312 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 ANGPTL5Q86XS5 388 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 TGIF2LYQ8IUE0 185 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 KRTAP1-3Q8IUG1 177 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 LRRC75A-AS1Q8N1F1 130 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 BPIFB2Q8N4F0 458 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 MAPK1IP1LQ8NDC0 245 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 OR13G1Q8NGZ3 307 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 ITLN1Q8WWA0 313 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 NEU4Q8WWR8 484 aaPredicted RBP8.34□□□□□ -1.07
PSEN1-213ENST00000555386 PIGCQ92535 297 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 FAM168AQ92567 244 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 OR2V2Q96R30 315 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 ADAT1Q9BUB4 502 aaKnown RBP8.34□□□□□ -1.07
PSEN1-213ENST00000555386 PAPOLGQ9BWT3 736 aaKnown RBP8.34□□□□□ -1.07
PSEN1-213ENST00000555386 CHIAQ9BZP6 476 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 FBXO9Q9UK97 447 aaPredicted RBP8.34□□□□□ -1.07
PSEN1-213ENST00000555386 ANAPC10Q9UM13 185 aa8.34□□□□□ -1.07
PSEN1-213ENST00000555386 MRPS28Q9Y2Q9 187 aaKnown RBP8.34□□□□□ -1.07
PSEN1-213ENST00000555386 IGHV4-30-2A0A087WSY4 118 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 A6NJY4 79 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 DHRS7CA6NNS2 312 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 MCRIP1C9JLW8 97 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 MLNRO43193 412 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 MPC2O95563 127 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 PAX1P15863 534 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 FAHP16930 419 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 NAT1P18440 290 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 ACKR3P25106 362 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 CBX5P45973 191 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 PDLIM4P50479 330 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 RAB14P61106 215 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 SEC61A1P61619 476 aaKnown RBP8.33□□□□□ -1.08
PSEN1-213ENST00000555386 FGL1Q08830 312 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 EXOSC2Q13868 293 aaKnown RBP8.33□□□□□ -1.08
PSEN1-213ENST00000555386 ARL6IP1Q15041 203 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 ATPAF1Q5TC12 328 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-213ENST00000555386 SHEQ5VZ18 495 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 TRAPPC6BQ86SZ2 158 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 OR8H3Q8N146 312 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 C12orf45Q8N5I9 185 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-213ENST00000555386 PNLDC1Q8NA58 520 aaKnown RBP8.33□□□□□ -1.08
PSEN1-213ENST00000555386 OR56B1Q8NGI3 324 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 OR52B4Q8NGK2 314 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 OR14K1Q8NGZ2 314 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 PP6455Q8WZ26 134 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 CCL17Q92583 94 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 SPSB4Q96A44 273 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 URM1Q9BTM9 101 aaKnown RBP8.33□□□□□ -1.08
PSEN1-213ENST00000555386 DPCDQ9BVM2 203 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-213ENST00000555386 TINAGL1Q9GZM7 467 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-213ENST00000555386 EGLN1Q9GZT9 426 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 OPA3Q9H6K4 179 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 NARFLQ9H6Q4 476 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 IFT46Q9NQC8 304 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.33□□□□□ -1.08
PSEN1-213ENST00000555386 UFSP2Q9NUQ7 469 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 ZDHHC8Q9ULC8 765 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 PIGLQ9Y2B2 252 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 V9GYS6 101 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 CR1P17927 2039 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 ZANQ9Y493 2812 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 CSPG4Q6UVK1 2322 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 TLN2Q9Y4G6 2542 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 TANC2Q9HCD6 1990 aa8.33□□□□□ -1.08
PSEN1-213ENST00000555386 IGHV1-69-2A0A0G2JMI3 117 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 ZNF850A8MQ14 1090 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 LEUTXA8MZ59 168 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 H7C1Q1 480 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 M0QYG6 137 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 GOSR2O14653 212 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms