RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 SNRPD1P62314 119 aaKnown RBP8.3□□□□□ -1.08
SIX4-202ENST00000554079 SRPXP78539 464 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 SCGB2A2Q13296 93 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 CNN3Q15417 329 aaKnown RBP8.3□□□□□ -1.08
SIX4-202ENST00000554079 MSMO1Q15800 293 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 SAMD13Q5VXD3 122 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 ZNF787Q6DD87 383 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 OR4A47Q6IF82 309 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 BHLHA15Q7RTS1 189 aaPredicted RBP8.3□□□□□ -1.08
SIX4-202ENST00000554079 ODF3L1Q8IXM7 274 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 PNKDQ8N490 385 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 LRTM2Q8N967 370 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 SLC38A9Q8NBW4 561 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 OR52L2PQ8NGH6 319 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 OR5B3Q8NH48 314 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 C18orf12Q96KH6 178 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 B9D1Q9UPM9 204 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 OBSL1O75147 1896 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 LOC107986453A0A1B0GWG9 222 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 G3V4G9 280 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 TNFSF15O95150 251 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 ONECUT2O95948 504 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 SCGB1A1P11684 91 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 DUSP1P28562 367 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 LHX2P50458 406 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 DUSP3P51452 185 aaPredicted RBP8.29□□□□□ -1.08
SIX4-202ENST00000554079 TMEM50BP56557 158 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 CSNK2A1P68400 391 aaPredicted RBP8.29□□□□□ -1.08
SIX4-202ENST00000554079 PAX2Q02962 417 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 CD226Q15762 336 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 ZIC1Q15915 447 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 PSG3Q16557 428 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 ITPRIPL2Q3MIP1 535 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 KRTCAP3Q53RY4 240 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 COX15Q7KZN9 410 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 LYZL2Q7Z4W2 148 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 SULF2Q8IWU5 870 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 TMEM217Q8N7C4 229 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 ZIC4Q8N9L1 334 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 CSNK2A3Q8NEV1 391 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 OR4F17Q8NGA8 305 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 OR52R1Q8NGF1 315 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 MBD3L1Q8WWY6 194 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 ARRDC3Q96B67 414 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 BTF3L4Q96K17 158 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 ZNF48Q96MX3 618 aaPredicted RBP8.29□□□□□ -1.08
SIX4-202ENST00000554079 OR4F4Q96R69 305 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 DNAJB12Q9NXW2 375 aaKnown RBP8.29□□□□□ -1.08
SIX4-202ENST00000554079 HHLA2Q9UM44 414 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 VDAC3Q9Y277 283 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 PHF3Q92576 2039 aaKnown RBP8.29□□□□□ -1.08
SIX4-202ENST00000554079 A0A1W2PNV4 684 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 CEBPZOSA8MTT3 80 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 BGLAPP02818 100 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 WNT2P09544 360 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 ECI1P42126 302 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 GRK6P43250 576 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 CSNK1G2P78368 415 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 ROM1Q03395 351 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 ZNF726P1Q15940 193 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 DUSP28Q4G0W2 176 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 FFAR4Q5NUL3 377 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 RAET1LQ5VY80 246 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 OTPQ5XKR4 325 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 FAM71F2Q6NXP2 309 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 KCNIP4Q6PIL6 250 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 ZAR1Q86SH2 424 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.29□□□□□ -1.08
SIX4-202ENST00000554079 LGI3Q8N145 548 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 MUC15Q8N387 334 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 PLPPR1Q8TBJ4 325 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 PSMF1Q92530 271 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 TMEM186Q96B77 213 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 SARAFQ96BY9 339 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 PATZ1Q9HBE1 687 aaKnown RBP8.29□□□□□ -1.08
SIX4-202ENST00000554079 RNF186Q9NXI6 227 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.29□□□□□ -1.08
SIX4-202ENST00000554079 ZNF780BQ9Y6R6 833 aa8.29□□□□□ -1.08
SIX4-202ENST00000554079 A0A1W2PPV9 198 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 HS3ST1O14792 307 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 SH2D1BO14796 132 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 TNFRSF10CO14798 259 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 SPINT1O43278 529 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 ERI3O43414 337 aaKnown RBP8.28□□□□□ -1.08
SIX4-202ENST00000554079 TOX4O94842 621 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 HPNP05981 417 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 ANOS1P23352 680 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 DYNLT3P51808 116 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 SNU13P55769 128 aaKnown RBP8.28□□□□□ -1.08
SIX4-202ENST00000554079 YPEL3P61236 119 aaPredicted RBP8.28□□□□□ -1.08
SIX4-202ENST00000554079 ABHD17CQ6PCB6 329 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 SLC22A24Q8N4F4 322 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 ASB10Q8WXI3 467 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 KLHDC3Q9BQ90 382 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 DECR2Q9NUI1 292 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 RYDENQ9NUL5 291 aaKnown RBP8.28□□□□□ -1.08
SIX4-202ENST00000554079 PLA2G3Q9NZ20 509 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 CLEC4EQ9ULY5 219 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 PSG11Q9UQ72 335 aa8.28□□□□□ -1.08
SIX4-202ENST00000554079 CENPFP49454 3210 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms