RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 ZNF649Q9BS31 505 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 MND1Q9BWT6 205 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 PRSS22Q9GZN4 317 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 COMMD4Q9H0A8 199 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 ZNF702PQ9H963 129 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 HMG20AQ9NP66 347 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 AMBNQ9NP70 447 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 ISYNA1Q9NPH2 558 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 ABCB10Q9NRK6 738 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 BABAM2Q9NXR7 383 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 GNG8Q9UK08 70 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 HHLA2Q9UM44 414 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 FOXJ3Q9UPW0 622 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 SIGLEC9Q9Y336 463 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 SESN1Q9Y6P5 492 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 IGHV2-26A0A0B4J1V2 119 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 OR4C45A6NMZ5 311 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 J3QLW9 94 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 SH2D1BO14796 132 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 MYL12BO14950 172 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 OGG1O15527 345 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 RGS10O43665 173 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 XPNPEP2O43895 674 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 PSPNO60542 156 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 FBXO24O75426 580 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 KDM4BO94953 1096 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 APOL3O95236 402 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 CSN2P05814 226 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 ZNF19P17023 458 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 ZNF20P17024 532 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 BCL3P20749 454 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 PAX6P26367 422 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 HTR1DP28221 377 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 CD34P28906 385 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 OR3A1P47881 315 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 ETV1P50549 477 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 P2RX3P56373 397 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 WNT4P56705 351 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 OR12D2P58182 307 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 NANOS3P60323 173 aaKnown RBP5.32□□□□□ -1.56
SLIRP-203ENST00000554074 EMX1Q04741 257 aaPredicted RBP5.32□□□□□ -1.56
SLIRP-203ENST00000554074 PDZK1IP1Q13113 114 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 ALKBH1Q13686 389 aaKnown RBP5.32□□□□□ -1.56
SLIRP-203ENST00000554074 EDDM3AQ14507 147 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 GRK1Q15835 563 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 FAM189A2Q15884 450 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 SSX2Q16385 188 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 BEAN1Q3B7T3 259 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 KCTD21Q4G0X4 260 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 TP53I3Q53FA7 332 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 SAMD5Q5TGI4 173 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 OR52W1Q6IF63 320 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 HEPN1Q6WQI6 88 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 AHSA2Q719I0 299 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 REC114Q7Z4M0 266 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 RTN4RL2Q86UN3 420 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 LHFPL3Q86UP9 236 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 NDUFA11Q86Y39 141 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 RDH10Q8IZV5 341 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 BATF2Q8N1L9 274 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 SVOPQ8N4V2 548 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 ZNF676Q8N7Q3 588 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 NANOGP1Q8N7R0 232 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 CHST4Q8NCG5 386 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 OR4S1Q8NGB4 309 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 OR52N4Q8NGI2 321 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 ZNF596Q8TC21 504 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 FCGR1BQ92637 280 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 CREB3L1Q96BA8 519 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 ADAT3Q96EY9 351 aaPredicted RBP5.32□□□□□ -1.56
SLIRP-203ENST00000554074 PELI1Q96FA3 418 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 C4orf36Q96KX1 117 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 OPALINQ96PE5 141 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 CLEC7AQ9BXN2 247 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 WNT10AQ9GZT5 417 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 TMEM133Q9H2Q1 129 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 GAL3ST2Q9H3Q3 398 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 NEK6Q9HC98 313 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 RBFOX1Q9NWB1 397 aaKnown RBP5.32□□□□□ -1.56
SLIRP-203ENST00000554074 TAS2R3Q9NYW6 316 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 FRRS1LQ9P0K9 344 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 AASSQ9UDR5 926 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 MYRFQ9Y2G1 1151 aa5.32□□□□□ -1.56
SLIRP-203ENST00000554074 A0A087X0M5 115 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 TRGV10A0A0A0MS01 117 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 IGKV1-12A0A0C4DH73 117 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 A0A1B0GX30 115 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 PTGES3LE9PB15 166 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 H3BSH0 61 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 F2RL2O00254 374 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 TNFAIP8O95379 198 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 OR2H2O95918 312 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 IGKV1D-12P01611 117 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 IGLV1-47P01700 117 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 VSIG10L2P0DP72 767 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 PRKACAP17612 351 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 GABRR1P24046 479 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 RANBP1P43487 201 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 NPBWR2P48146 333 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 POU3F4P49335 361 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms