RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 ZNF714Q96N38 554 aa16.61■□□□□ 0.25
FOXA1-203ENST00000553751 CHIAQ9BZP6 476 aa16.61■□□□□ 0.25
FOXA1-203ENST00000553751 PPA2Q9H2U2 334 aa16.61■□□□□ 0.25
FOXA1-203ENST00000553751 HEXA-AS1Q9H8Q6 139 aa16.61■□□□□ 0.25
FOXA1-203ENST00000553751 TNFRSF19Q9NS68 423 aa16.61■□□□□ 0.25
FOXA1-203ENST00000553751 IL36GQ9NZH8 169 aa16.61■□□□□ 0.25
FOXA1-203ENST00000553751 RAB26Q9ULW5 256 aa16.61■□□□□ 0.25
FOXA1-203ENST00000553751 RGS10O43665 173 aa16.6■□□□□ 0.25
FOXA1-203ENST00000553751 CSN2P05814 226 aa16.6■□□□□ 0.25
FOXA1-203ENST00000553751 TGFBR2P37173 567 aa16.6■□□□□ 0.25
FOXA1-203ENST00000553751 VHLP40337 213 aa16.6■□□□□ 0.25
FOXA1-203ENST00000553751 SCN1BQ07699 218 aa16.6■□□□□ 0.25
FOXA1-203ENST00000553751 MED22Q15528 200 aa16.6■□□□□ 0.25
FOXA1-203ENST00000553751 PIGYQ3MUY2 71 aa16.6■□□□□ 0.25
FOXA1-203ENST00000553751 MIDNQ504T8 468 aa16.6■□□□□ 0.25
FOXA1-203ENST00000553751 C17orf50Q8WW18 174 aa16.6■□□□□ 0.25
FOXA1-203ENST00000553751 AJUBAQ96IF1 538 aa16.6■□□□□ 0.25
FOXA1-203ENST00000553751 FOXJ3Q9UPW0 622 aa16.6■□□□□ 0.25
FOXA1-203ENST00000553751 DEGS1O15121 323 aa16.59■□□□□ 0.25
FOXA1-203ENST00000553751 IGHV1-8P0DP01 117 aa16.59■□□□□ 0.25
FOXA1-203ENST00000553751 COX7A1P24310 79 aa16.59■□□□□ 0.25
FOXA1-203ENST00000553751 MAPK3P27361 379 aaPredicted RBP16.59■□□□□ 0.25
FOXA1-203ENST00000553751 IL13RA2Q14627 380 aa16.59■□□□□ 0.25
FOXA1-203ENST00000553751 INSL4Q14641 139 aa16.59■□□□□ 0.25
FOXA1-203ENST00000553751 THRSPQ92748 146 aa16.59■□□□□ 0.25
FOXA1-203ENST00000553751 TAF15Q92804 592 aaKnown RBP eCLIP16.59■□□□□ 0.25
FOXA1-203ENST00000553751 COQ2Q96H96 371 aa16.59■□□□□ 0.25
FOXA1-203ENST00000553751 NR1H4Q96RI1 486 aaPredicted RBP16.59■□□□□ 0.25
FOXA1-203ENST00000553751 METTL9Q9H1A3 318 aa16.59■□□□□ 0.25
FOXA1-203ENST00000553751 HTR3BO95264 441 aa16.58■□□□□ 0.24
FOXA1-203ENST00000553751 MAS1P04201 325 aa16.58■□□□□ 0.24
FOXA1-203ENST00000553751 AESQ08117 197 aa16.58■□□□□ 0.24
FOXA1-203ENST00000553751 ATXN7L3Q14CW9 347 aaPredicted RBP16.58■□□□□ 0.24
FOXA1-203ENST00000553751 AWAT1Q58HT5 328 aa16.58■□□□□ 0.24
FOXA1-203ENST00000553751 NHLRC3Q5JS37 347 aa16.58■□□□□ 0.24
FOXA1-203ENST00000553751 PRSS48Q7RTY5 328 aa16.58■□□□□ 0.24
FOXA1-203ENST00000553751 LYPD6Q86Y78 171 aa16.58■□□□□ 0.24
FOXA1-203ENST00000553751 MS4A15Q8N5U1 240 aa16.58■□□□□ 0.24
FOXA1-203ENST00000553751 TMED9Q9BVK6 235 aa16.58■□□□□ 0.24
FOXA1-203ENST00000553751 ING4Q9UNL4 249 aa16.58■□□□□ 0.24
FOXA1-203ENST00000553751 UBE2J1Q9Y385 318 aaPredicted RBP16.58■□□□□ 0.24
FOXA1-203ENST00000553751 TRAV24A0A0B4J272 114 aa16.57■□□□□ 0.24
FOXA1-203ENST00000553751 FAM181BA6NEQ2 426 aa16.57■□□□□ 0.24
FOXA1-203ENST00000553751 PAHP00439 452 aa16.57■□□□□ 0.24
FOXA1-203ENST00000553751 GLIPR1P48060 266 aa16.57■□□□□ 0.24
FOXA1-203ENST00000553751 TAF9Q16594 264 aa16.57■□□□□ 0.24
FOXA1-203ENST00000553751 ACSM3Q53FZ2 586 aa16.57■□□□□ 0.24
FOXA1-203ENST00000553751 RBM48Q5RL73 367 aaKnown RBP16.57■□□□□ 0.24
FOXA1-203ENST00000553751 UNQ9370/PRO34162Q6UXP9 181 aa16.57■□□□□ 0.24
FOXA1-203ENST00000553751 JAGN1Q8N5M9 183 aa16.57■□□□□ 0.24
FOXA1-203ENST00000553751 BEND2Q8NDZ0 799 aa16.57■□□□□ 0.24
FOXA1-203ENST00000553751 MUL1Q969V5 352 aa16.57■□□□□ 0.24
FOXA1-203ENST00000553751 DPAGT1Q9H3H5 408 aa16.57■□□□□ 0.24
FOXA1-203ENST00000553751 ZNF581Q9P0T4 197 aa16.57■□□□□ 0.24
FOXA1-203ENST00000553751 ST3GAL6Q9Y274 331 aa16.57■□□□□ 0.24
FOXA1-203ENST00000553751 ODAMA1E959 279 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 FUOMA2VDF0 154 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 ODF3BA8MYP8 253 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 HSPB6O14558 160 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 SC5DO75845 299 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 CLPXO76031 633 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 SERPINA2P20848 420 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 GP2P55259 537 aaKnown RBP16.56■□□□□ 0.24
FOXA1-203ENST00000553751 RBM11P57052 281 aaKnown RBP16.56■□□□□ 0.24
FOXA1-203ENST00000553751 FOXL1Q12952 345 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 GPR50Q13585 617 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 PAN3Q58A45 887 aaKnown RBP16.56■□□□□ 0.24
FOXA1-203ENST00000553751 FAM27D1Q5T7N8 215 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 LIPKQ5VXJ0 399 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 TRAPPC6BQ86SZ2 158 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 CDH26Q8IXH8 852 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 OSR2Q8N2R0 312 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 OR13D1Q8NGV5 346 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 UFD1Q92890 307 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 S100A13Q99584 98 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 CCDC90BQ9GZT6 254 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 PPIL3Q9H2H8 161 aaKnown RBP16.56■□□□□ 0.24
FOXA1-203ENST00000553751 SESN1Q9Y6P5 492 aa16.56■□□□□ 0.24
FOXA1-203ENST00000553751 TRGV10A0A0A0MS01 117 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 A0A1W2PP11 408 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 ZNF780AO75290 641 aaPredicted RBP16.55■□□□□ 0.24
FOXA1-203ENST00000553751 CSTBP04080 98 aaKnown RBP16.55■□□□□ 0.24
FOXA1-203ENST00000553751 CFPP27918 469 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 MAP2K4P45985 399 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 TPBGQ13641 420 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 SLC22A6Q4U2R8 563 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 KRBOX4Q5JUW0 171 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 NKAIN3Q8N8D7 197 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 OR11H6Q8NGC7 330 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 DYRK2Q92630 601 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 CORO2AQ92828 525 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 GAL3ST2Q9H3Q3 398 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 IFT22Q9H7X7 185 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 ISYNA1Q9NPH2 558 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 ING3Q9NXR8 418 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 BLOC1S6Q9UL45 172 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 MRPS28Q9Y2Q9 187 aaKnown RBP16.55■□□□□ 0.24
FOXA1-203ENST00000553751 FBN3Q75N90 2809 aa16.55■□□□□ 0.24
FOXA1-203ENST00000553751 GPR137BO60478 399 aa16.54■□□□□ 0.24
FOXA1-203ENST00000553751 MMP23AO75900 390 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms