RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 FAM90A5PA8MXJ8 464 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 CCL24O00175 119 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 FAM90A15PP0C7V4 464 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 FAM90A13PP0C7W8 464 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 FAM90A14PP0C7W9 464 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 FAM90A24PP0C7X0 464 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 OCM2P0CE71 109 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 OCMP0CE72 109 aaPredicted RBP11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 UBCP0CG48 685 aaKnown RBP11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 PRKACBP22694 351 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 NFYBP25208 207 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 PTGES3Q15185 160 aaKnown RBP11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 KRBOX4Q5JUW0 171 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 NKAPLQ5M9Q1 402 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 C9orf66Q5T8R8 295 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 LHFPL2Q6ZUX7 228 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 BCDIN3DQ7Z5W3 292 aaKnown RBP11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 SLC35E3Q7Z769 313 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 GID4Q8IVV7 300 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 C5orf56Q8N8D9 126 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 OR5M8Q8NGP6 311 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 OR8U1Q8NH10 309 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 OR56B4Q8NH76 319 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 CANT1Q8WVQ1 401 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 RAX2Q96IS3 184 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 NSL1Q96IY1 281 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 HRASLS5Q96KN8 279 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 KRT84Q9NSB2 600 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 LOC107986453A0A1B0GWG9 222 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 METTL15A6NJ78 407 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 AQP12BA6NM10 295 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 FAM107AO95990 144 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 CSN2P05814 226 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 ZNF44P15621 663 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 LUMP51884 338 aaPredicted RBP11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 SCN1BQ07699 218 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 BNIP1Q12981 228 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 PDZK1IP1Q13113 114 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 AADACL4Q5VUY2 407 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 TEX38Q6PEX7 206 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 AQP12AQ8IXF9 295 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 DRAM1Q8N682 238 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 TCEANCQ8N8B7 351 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 CHST4Q8NCG5 386 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 TMEM163Q8TC26 289 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 DUX3Q96PT4 197 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 PRR25Q96S07 402 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 TBX5Q99593 518 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 GON7Q9BXV9 100 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 ING3Q9NXR8 418 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 OR6C3Q9NZP0 311 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 LINC00527Q9UJ94 153 aa11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 EPPK1P58107 5090 aaKnown RBP11.19□□□□□ -0.62
CHMP1A-210ENST00000551981 KBTBD11-OT1A0A1B0GTJ5 212 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 SULT1C4O75897 302 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 IGHG2P01859 326 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 OR2T7P0C7T2 308 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 ZNF20P17024 532 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 ATF1P18846 271 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 ECI1P42126 302 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 RAB7AP51149 207 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 MADCAM1Q13477 382 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 UTS2BQ765I0 119 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 SSX6Q7RTT6 188 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 FAM220AQ7Z4H9 259 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 STPG2Q8N412 459 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 Q8NFD4 153 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 SPSB1Q96BD6 273 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 NRBF2Q96F24 287 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 ASCL2Q99929 193 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 COMMD4Q9H0A8 199 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 RHOFQ9HBH0 211 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 SACSQ9NZJ4 4579 aa11.18□□□□□ -0.62
CHMP1A-210ENST00000551981 IGKV1-9A0A0C4DH69 117 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 A0A1W2PPI3 338 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 A0A1W2PQL4 384 aaPredicted RBP11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 J3QR06 171 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 M0R129 80 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 KDM4BO94953 1096 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 CALB2P22676 271 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 HNF4GQ14541 408 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 ATXN7L3Q14CW9 347 aaPredicted RBP11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 PNLIPRP3Q17RR3 467 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 C17orf58Q2M2W7 97 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 CXorf66Q5JRM2 361 aaPredicted RBP11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 FAHD1Q6P587 224 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 OR8H3Q8N146 312 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 PRSS35Q8N3Z0 413 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 ZNF565Q8N9K5 539 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 OR10H4Q8NGA5 316 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 MUC7Q8TAX7 377 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 HAVCR2Q8TDQ0 301 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 ADAT3Q96EY9 351 aaPredicted RBP11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 COQ2Q96H96 371 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 KIRREL1Q96J84 757 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 OPALINQ96PE5 141 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 DCLRE1BQ9H816 532 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 NEK6Q9HC98 313 aa11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 WARS2Q9UGM6 360 aaKnown RBP11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 BIRC6Q9NR09 4857 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms