RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 SHBQ15464 509 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 RNF151Q2KHN1 245 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 BSXQ3C1V8 233 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 SNAI3Q3KNW1 292 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 DUSP28Q4G0W2 176 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 ALG10Q5BKT4 473 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 LRRC10Q5BKY1 277 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 PLAC9Q5JTB6 97 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 MRPL2Q5T653 305 aaKnown RBP4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 C1orf189Q5VU69 101 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 C1orf140Q5VVS0 124 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 RTL6Q6ICC9 239 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 FAM71F2Q6NXP2 309 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 UNQ5815/PRO19632Q6UWF5 114 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 MEX3BQ6ZN04 569 aaKnown RBP4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 TMEM182Q6ZP80 229 aaPredicted RBP4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 MUC15Q8N387 334 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 SLC16A11Q8NCK7 471 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 OR4F17Q8NGA8 305 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 OR2G3Q8NGZ4 309 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 OR2T10Q8NGZ9 312 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 OR2L2Q8NH16 312 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 FNDC9Q8TBE3 224 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 SSC4DQ8WTU2 575 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 SKA2Q8WVK7 121 aaPredicted RBP4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 TMEM37Q8WXS4 190 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 C11orf40Q8WZ69 217 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 OVCA2Q8WZ82 227 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 WBP2Q969T9 261 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 C8orf44Q96CB5 159 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 GNPNAT1Q96EK6 184 aaPredicted RBP4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 WDYHV1Q96HA8 205 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 LRRC3BQ96PB8 259 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 CIB3Q96Q77 187 aaPredicted RBP4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 OR4F4Q96R69 305 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 AMELYQ99218 206 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 VAMP8Q9BV40 100 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 ZNF700Q9H0M5 742 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 LPAR5Q9H1C0 372 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 MKKSQ9NPJ1 570 aaPredicted RBP4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 TMEM9BQ9NQ34 198 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 PRSS50Q9UI38 385 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 WDR45Q9Y484 360 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 PPIAL4AQ9Y536 164 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 TMEM14AQ9Y6G1 99 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 PIKFYVEQ9Y2I7 2098 aa4.57□□□□□ -1.68
LSM3P2-201ENST00000551246 IGKV1D-42A0A075B6H8 117 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 NSG1A0A0A6YYJ2 146 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 IGSF23A1L1A6 192 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 ZNF814B7Z6K7 855 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 C4orf51C9J302 202 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 G3V4G9 280 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 H7BYZ3 331 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 K7ERU9 68 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 CORTO00230 105 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 HS3ST1O14792 307 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 TAX1BP3O14907 124 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 B3GAT3O94766 335 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 KBTBD11O94819 623 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 CDS2O95674 445 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 TIMP1P01033 207 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 BGLAPP02818 100 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 HIST1H1DP16402 221 aaKnown RBP4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 TSPOP30536 169 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 SFTPDP35247 375 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 NPBWR2P48146 333 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 FLT3LGP49771 235 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 LHX2P50458 406 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 CEBPGP53567 150 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 PRKAG1P54619 331 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 CLDN2P57739 230 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 TPPP2P59282 170 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 TAS2R30P59541 319 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 CSNK1G2P78368 415 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 FOXL1Q12952 345 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 EIF3IQ13347 325 aaKnown RBP4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 ZNF266Q14584 549 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 MPV17LQ2QL34 196 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 SMIM21Q3B7S5 101 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 UFSP1Q6NVU6 142 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 WDR73Q6P4I2 378 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 TOMM20LQ6UXN7 152 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 COLCA1Q6ZS62 124 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 LHFPL2Q6ZUX7 228 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 HSD11B1LQ7Z5J1 315 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 COMMD2Q86X83 199 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 STPG3Q8N7X2 389 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 OR5L1Q8NGL2 311 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 OTOSQ8NHW6 89 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 PLPPR1Q8TBJ4 325 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 FAM216AQ8WUB2 273 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 OR1E3Q8WZA6 343 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 APH1AQ96BI3 265 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 MSI2Q96DH6 328 aaKnown RBP4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 SLAMF6Q96DU3 332 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 CAPNS2Q96L46 248 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 ADOQ96SZ5 270 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 CMKLR1Q99788 373 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 VPS25Q9BRG1 176 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 TM2D1Q9BX74 207 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms