RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 BAIAP2L2Q6UXY1 529 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 THNSL2Q86YJ6 484 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 RDH10Q8IZV5 341 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 LINC00482Q8N8I6 264 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 OR51D1Q8NGF3 324 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 OR2G2Q8NGZ5 317 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 DPF1Q92782 380 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 SLC7A6OSQ96CW6 309 aaPredicted RBP10.22□□□□□ -0.77
PTCH1-221ENST00000550914 MBOAT4Q96T53 435 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 ZNF286AQ9HBT8 521 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 OR6C3Q9NZP0 311 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 GNG8Q9UK08 70 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 GSTK1Q9Y2Q3 226 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 MOB4Q9Y3A3 225 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 HSPE1-MOB4S4R3N1 261 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 IGKV1-12A0A0C4DH73 117 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 PSMB11A5LHX3 300 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 FAM90A18PA6NE21 464 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 FAM90A16PA6NEW6 464 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 FAM90A20PA6NIJ5 464 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 ZNF729A6NN14 1252 aaPredicted RBP10.21□□□□□ -0.77
PTCH1-221ENST00000550914 FAM90A9PA6NNJ1 464 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 FAM90A12PA8MX19 464 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 FAM90A5PA8MXJ8 464 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 APOL3O95236 402 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 IGKV1D-12P01611 117 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 FAM90A15PP0C7V4 464 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 FAM90A13PP0C7W8 464 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 FAM90A14PP0C7W9 464 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 FAM90A24PP0C7X0 464 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 FAM106CPP0CH98 169 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 FASP25445 335 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 CCR9P51686 369 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 SNU13P55769 128 aaKnown RBP10.21□□□□□ -0.77
PTCH1-221ENST00000550914 ZNF85Q03923 595 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 DEFB121Q5J5C9 76 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 KHDC1LQ5JSQ8 128 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 FGGYQ96C11 551 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 CIB1Q99828 191 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 B9D2Q9BPU9 175 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 MCRIP2Q9BUT9 160 aaKnown RBP10.21□□□□□ -0.77
PTCH1-221ENST00000550914 GABARAPL3Q9BY60 117 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 NCOR1P1Q9H4R4 102 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 NEK6Q9HC98 313 aa10.21□□□□□ -0.77
PTCH1-221ENST00000550914 ZMAT5Q9UDW3 170 aaKnown RBP10.21□□□□□ -0.77
PTCH1-221ENST00000550914 AMMECR1Q9Y4X0 333 aaPredicted RBP10.21□□□□□ -0.77
PTCH1-221ENST00000550914 KBTBD11-OT1A0A1B0GTJ5 212 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 SLC33A1O00400 549 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-221ENST00000550914 OCM2P0CE71 109 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 OCMP0CE72 109 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-221ENST00000550914 CALCBP10092 127 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 FCGR1AP12314 374 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 ZNF44P15621 663 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 GDNFP39905 211 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 TP53I3Q53FA7 332 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 KRBOX4Q5JUW0 171 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 C11orf87Q6NUJ2 197 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 Q6P435 159 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 C10orf99Q6UWK7 81 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 MRPL41Q8IXM3 137 aaKnown RBP10.2□□□□□ -0.78
PTCH1-221ENST00000550914 OR9G1Q8NH87 305 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 BCAS4Q8TDM0 211 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 CHPT1Q8WUD6 406 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 TRUB1Q8WWH5 349 aaKnown RBP10.2□□□□□ -0.78
PTCH1-221ENST00000550914 EME1Q96AY2 570 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 COQ2Q96H96 371 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 LINC00574Q9H8X3 128 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 ZFP57Q9NU63 452 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 FRRS1LQ9P0K9 344 aa10.2□□□□□ -0.78
PTCH1-221ENST00000550914 FAM172BPA6NC97 362 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 SLC16A6O15403 523 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 FGF16O43320 207 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 RPSAP08865 295 aaKnown RBP10.19□□□□□ -0.78
PTCH1-221ENST00000550914 CGB3P0DN86 165 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 CGB7P0DN87 165 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 OR3A4PP47883 348 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 THBS3P49746 956 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 RPL23AP62750 156 aaKnown RBP10.19□□□□□ -0.78
PTCH1-221ENST00000550914 PAX5Q02548 391 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 CD69Q07108 199 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 RBM39Q14498 530 aaKnown RBP10.19□□□□□ -0.78
PTCH1-221ENST00000550914 C17orf58Q2M2W7 97 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 C9orf152Q5JTZ5 239 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 ETV3LQ6ZN32 361 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 COMMD1Q8N668 190 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 ZNF565Q8N9K5 539 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 OR51T1Q8NGJ9 327 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 TOMM40LQ969M1 308 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 RFT1Q96AA3 541 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 RPEQ96AT9 228 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 KIRREL1Q96J84 757 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 WWC2-AS2Q96NR7 200 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 OSBPL10Q9BXB5 764 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 AP4S1Q9Y587 144 aa10.19□□□□□ -0.78
PTCH1-221ENST00000550914 RYR3Q15413 4870 aa10.18□□□□□ -0.78
PTCH1-221ENST00000550914 SH2D7A6NKC9 451 aaPredicted RBP10.18□□□□□ -0.78
PTCH1-221ENST00000550914 J3QR06 171 aa10.18□□□□□ -0.78
PTCH1-221ENST00000550914 J3QRE1 110 aa10.18□□□□□ -0.78
PTCH1-221ENST00000550914 DEGS1O15121 323 aa10.18□□□□□ -0.78
PTCH1-221ENST00000550914 HTR1AP08908 422 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms