RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 HNF4GQ14541 408 aa8.2□□□□□ -1.1
VPS29-208ENST00000550267 KPNB1Q14974 876 aaKnown RBP8.2□□□□□ -1.1
VPS29-208ENST00000550267 TEX38Q6PEX7 206 aa8.2□□□□□ -1.1
VPS29-208ENST00000550267 SLC25A26Q70HW3 274 aa8.2□□□□□ -1.1
VPS29-208ENST00000550267 THNSL2Q86YJ6 484 aa8.2□□□□□ -1.1
VPS29-208ENST00000550267 ZNF679Q8IYX0 411 aa8.2□□□□□ -1.1
VPS29-208ENST00000550267 TOMM40LQ969M1 308 aa8.2□□□□□ -1.1
VPS29-208ENST00000550267 CREB3L1Q96BA8 519 aa8.2□□□□□ -1.1
VPS29-208ENST00000550267 YIPF3Q9GZM5 350 aa8.2□□□□□ -1.1
VPS29-208ENST00000550267 SEBOXQ9HB31 216 aaPredicted RBP8.2□□□□□ -1.1
VPS29-208ENST00000550267 NKX1-2Q9UD57 310 aaPredicted RBP8.2□□□□□ -1.1
VPS29-208ENST00000550267 IKZF2Q9UKS7 526 aa8.2□□□□□ -1.1
VPS29-208ENST00000550267 COPS3Q9UNS2 423 aa8.2□□□□□ -1.1
VPS29-208ENST00000550267 SLC7A11Q9UPY5 501 aa8.2□□□□□ -1.1
VPS29-208ENST00000550267 DSCAML1Q8TD84 2053 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 H3BSH0 61 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 MAGEB4O15481 346 aaPredicted RBP8.19□□□□□ -1.1
VPS29-208ENST00000550267 FGF16O43320 207 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 ENTPD6O75354 484 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 ZNF254O75437 659 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 SLC2A5P22732 501 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 MAGEA2P43356 314 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 CDX1P47902 265 aaPredicted RBP8.19□□□□□ -1.1
VPS29-208ENST00000550267 GLIPR1P48060 266 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 APOFQ13790 326 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 DIAPH2-AS1Q14236 149 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 GINS1Q14691 196 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 UBE2V2Q15819 145 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 PNLIPRP3Q17RR3 467 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 SLC35D3Q5M8T2 416 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 BCL2L15Q5TBC7 163 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 CD300LDQ6UXZ3 194 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 PLEKHG7Q6ZR37 379 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 Q6ZSR3 168 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 ENTHD1Q8IYW4 607 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 DRAM1Q8N682 238 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 OR10G2Q8NGC3 310 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 CORO2AQ92828 525 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 RPEQ96AT9 228 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 CMTM5Q96DZ9 223 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 RBFOX1Q9NWB1 397 aaKnown RBP8.19□□□□□ -1.1
VPS29-208ENST00000550267 TAS2R3Q9NYW6 316 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 OR52A1Q9UKL2 312 aa8.19□□□□□ -1.1
VPS29-208ENST00000550267 SAMHD1Q9Y3Z3 626 aaKnown RBP8.19□□□□□ -1.1
VPS29-208ENST00000550267 A0A087X0M5 115 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 A0A1B0GX30 115 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 A0A1W2PPI3 338 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 CCRL2O00421 344 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 IGKV1D-33P01593 117 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 IGKV1-33P01594 117 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 HCKP08631 526 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 PRKACAP17612 351 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 BCL3P20749 454 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 ATP6V1B2P21281 511 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 NFYBP25208 207 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 PTGFRP43088 359 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 AESQ08117 197 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 GPR50Q13585 617 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 FHL3Q13643 280 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 ZNF146Q15072 292 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 C17orf58Q2M2W7 97 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 CXorf66Q5JRM2 361 aaPredicted RBP8.18□□□□□ -1.1
VPS29-208ENST00000550267 C16orf89Q6UX73 402 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 CYP2R1Q6VVX0 501 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 ELMOD2Q8IZ81 293 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 OR4D6Q8NGJ1 314 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 LEAP2Q969E1 77 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 FEVQ99581 238 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 APOL4Q9BPW4 351 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 MOB1AQ9H8S9 216 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 REEP1Q9H902 201 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 EDA2RQ9HAV5 297 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 PCDHB16Q9NRJ7 776 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 ING3Q9NXR8 418 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 GLS2Q9UI32 602 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 SIRT4Q9Y6E7 314 aaPredicted RBP8.18□□□□□ -1.1
VPS29-208ENST00000550267 R4GMQ9 66 aa8.18□□□□□ -1.1
VPS29-208ENST00000550267 ODAMA1E959 279 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 CCDC182A6NF36 153 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 DHRS7CA6NNS2 312 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 AP4M1O00189 453 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 OR2H2O95918 312 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 IGHV3-7P01780 117 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 GPR12P47775 334 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 INSL3P51460 131 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 FUT6P51993 359 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 FOXE3Q13461 319 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 ODF4Q2M2E3 257 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 OR2T5Q6IEZ7 315 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 Q8IYB0 196 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 FAM58AQ8N1B3 248 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 RNF152Q8N8N0 203 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 OR11H1Q8NG94 326 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 OR2T29Q8NH02 315 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 OR9G1Q8NH87 305 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 C4orf3Q8WVX3 66 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 ASB17Q8WXJ9 295 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 ISOC1Q96CN7 298 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 RNFT2Q96EX2 444 aa8.17□□□□□ -1.1
VPS29-208ENST00000550267 BORCS8Q96FH0 119 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms