RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 GAPTQ8N292 157 aa10.7□□□□□ -0.7
SLC38A1-206ENST00000549049 CRIM1Q9NZV1 1036 aa10.7□□□□□ -0.7
SLC38A1-206ENST00000549049 MRPS17Q9Y2R5 130 aaKnown RBP10.7□□□□□ -0.7
SLC38A1-206ENST00000549049 ICE1Q9Y2F5 2266 aa10.7□□□□□ -0.7
SLC38A1-206ENST00000549049 A0A1W2PR80 420 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 C5orf52A6NGY3 159 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 TERTO14746 1132 aaKnown RBP10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 CXCL12P48061 93 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 SUCLG1P53597 346 aaKnown RBP10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 FAM27BQ5VT28 67 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 EXTL1Q92935 676 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 TMEM54Q969K7 222 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 FOXB1Q99853 325 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 CCL28Q9NRJ3 127 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 DOCK11Q5JSL3 2073 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 MPPED1O15442 326 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 SEC11BP0C7V7 166 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 DYNLT3P51808 116 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 UBE2KP61086 200 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 C9orf152Q5JTZ5 239 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 FAM209BQ5JX69 171 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 ACER2Q5QJU3 275 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 ADPRHL1Q8NDY3 354 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 TMEM171Q8WVE6 324 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 SPSB1Q96BD6 273 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 PBDC1Q9BVG4 233 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 PROK2Q9HC23 129 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 FAM86C1Q9NVL1 165 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 HS3ST3B1Q9Y662 390 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 IGKV1D-13A0A0B4J2D9 117 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 ETV2O00321 342 aaPredicted RBP10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 PDCD6O75340 191 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 CLN5O75503 358 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 UMODP07911 640 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 IGKV1-13P0DP09 117 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 BCL3P20749 454 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 FOXG1P55316 489 aaPredicted RBP10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 DSCR4P56555 118 aaPredicted RBP10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 CTAG1AP78358 180 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 HLA-BQ31612 363 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 OR56B2PQ8NGI1 322 aa10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 RBM7Q9Y580 266 aaKnown RBP10.69□□□□□ -0.7
SLC38A1-206ENST00000549049 SYNGR3O43761 229 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 CTSSP25774 331 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 RPS16P62249 146 aaKnown RBP10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 TMEM267Q0VDI3 215 aaPredicted RBP10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 RAB35Q15286 201 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 CLEC12BQ2HXU8 276 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 C10orf128Q5T292 105 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 ZNF385CQ66K41 422 aaPredicted RBP10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 SUCNR1Q9BXA5 334 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 ZFP92A6NM28 416 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 CNOT4O95628 575 aaKnown RBP10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 IGLV3-1P01715 115 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 OR8U8P0C7N1 319 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 FUT3P21217 361 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 ALDH3B1P43353 468 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 FGF8P55075 233 aaPredicted RBP10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 MRPS34P82930 218 aaKnown RBP10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 LCN15Q6UWW0 184 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 ZNF818PQ6ZRF7 136 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 DPPA2Q7Z7J5 298 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 CYB561D1Q8N8Q1 229 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 OR1J1Q8NGS3 322 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 OR10D3Q8NH80 312 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 IFI44Q8TCB0 444 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 SMOC1Q9H4F8 434 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 TMEM38BQ9NVV0 291 aa10.68□□□□□ -0.7
SLC38A1-206ENST00000549049 IGLV3-32A0A0A0MS00 114 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 C9J4A7 227 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 CHST1O43916 411 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 VAMP5O95183 116 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 P04436 131 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 IAPPP10997 89 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 EDN3P14138 238 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 GDF1P27539 372 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 EPHA8P29322 1005 aaPredicted RBP10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 OTX1P32242 354 aaPredicted RBP10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 RND3P61587 244 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 RPS23P62266 143 aaKnown RBP10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 CDPF1Q6NVV7 123 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 CARFQ8N187 725 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 CCDC71LQ8N9Z2 235 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 CPNE4Q96A23 557 aaPredicted RBP10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 C18orf12Q96KH6 178 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 WNT5BQ9H1J7 359 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 CALHM2Q9HA72 323 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 GLRX2Q9NS18 164 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 SEMA5BQ9P283 1151 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 H3BQ15 152 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 HMGB3O15347 200 aaKnown RBP10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 RRP8O43159 456 aaKnown RBP10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 LY86O95711 162 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 TMEM50AO95807 157 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 CRYGSP22914 178 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 RAC1P63000 192 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 LYSMD4Q5XG99 296 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 RTL6Q6ICC9 239 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 LHFPL2Q6ZUX7 228 aa10.67□□□□□ -0.7
SLC38A1-206ENST00000549049 HIST2H3AQ71DI3 136 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms