RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 BDH1Q02338 343 aa9.48□□□□□ -0.89
TRAFD1-205ENST00000548277 HES1Q14469 280 aa9.48□□□□□ -0.89
TRAFD1-205ENST00000548277 LTC4SQ16873 150 aa9.48□□□□□ -0.89
TRAFD1-205ENST00000548277 TPTE2P1Q5T6R2 138 aa9.48□□□□□ -0.89
TRAFD1-205ENST00000548277 UNQ9370/PRO34162Q6UXP9 181 aa9.48□□□□□ -0.89
TRAFD1-205ENST00000548277 RTN4RL2Q86UN3 420 aa9.48□□□□□ -0.89
TRAFD1-205ENST00000548277 ENTHD1Q8IYW4 607 aa9.48□□□□□ -0.89
TRAFD1-205ENST00000548277 LEAP2Q969E1 77 aa9.48□□□□□ -0.89
TRAFD1-205ENST00000548277 SPACA5Q96QH8 159 aa9.48□□□□□ -0.89
TRAFD1-205ENST00000548277 ASCL2Q99929 193 aa9.48□□□□□ -0.89
TRAFD1-205ENST00000548277 GAL3ST2Q9H3Q3 398 aa9.48□□□□□ -0.89
TRAFD1-205ENST00000548277 EXOSC4Q9NPD3 245 aaKnown RBP9.48□□□□□ -0.89
TRAFD1-205ENST00000548277 IMPAD1Q9NX62 359 aa9.48□□□□□ -0.89
TRAFD1-205ENST00000548277 LOC107986453A0A1B0GWG9 222 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 SH2D1BO14796 132 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 OR2H2O95918 312 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 IGLV1-47P01700 117 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 ALPLP05186 524 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 OCM2P0CE71 109 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 OCMP0CE72 109 aaPredicted RBP9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 ZNF44P15621 663 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 CEACAM3P40198 252 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 MNDAP41218 407 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 RBP2P50120 134 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 PRRX1P54821 245 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 ISL1P61371 349 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 RPL23AP62750 156 aaKnown RBP9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 HLA-DRB5Q30154 266 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 ZIK1Q3SY52 487 aaPredicted RBP9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 HEPN1Q6WQI6 88 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 FAM220AQ7Z4H9 259 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 KLHL30-AS1Q8NEE0 82 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 CCDC54Q8NEL0 328 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 OR4D6Q8NGJ1 314 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 OR5D18Q8NGL1 313 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 TRUB1Q8WWH5 349 aaKnown RBP9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 RNF166Q96A37 237 aaPredicted RBP9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 FGGYQ96C11 551 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 RNFT2Q96EX2 444 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 ADAT3Q96EY9 351 aaPredicted RBP9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 HRASLS5Q96KN8 279 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 CHST5Q9GZS9 411 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 ORC6Q9Y5N6 252 aa9.47□□□□□ -0.89
TRAFD1-205ENST00000548277 IGKV1-9A0A0C4DH69 117 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 TRBV2A0A0J9YWF9 115 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 DAPL1A0PJW8 107 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 SERPINE3A8MV23 424 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 HSPB6O14558 160 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 EI24O14681 340 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 UBCP0CG48 685 aaKnown RBP9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 FAM106CPP0CH98 169 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 ATF1P18846 271 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 ERP29P30040 261 aaKnown RBP9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 DGCR2P98153 550 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 DIAPH2-AS1Q14236 149 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 ATXN7L3Q14CW9 347 aaPredicted RBP9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 ZNF146Q15072 292 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 KRBOX4Q5JUW0 171 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 TMEM244Q5VVB8 128 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 OR2W3Q7Z3T1 314 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 Q8IYB0 196 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 OR2G2Q8NGZ5 317 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 RPEQ96AT9 228 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 PRR25Q96S07 402 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 GPR61Q9BZJ8 451 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 NEK6Q9HC98 313 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 HMG20AQ9NP66 347 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 AASSQ9UDR5 926 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 MOB4Q9Y3A3 225 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 PCDHGB5Q9Y5G0 923 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 HSPE1-MOB4S4R3N1 261 aa9.46□□□□□ -0.9
TRAFD1-205ENST00000548277 IGKV1-12A0A0C4DH73 117 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 FUOMA2VDF0 154 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 LINC01548A6NM66 108 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 H3BNX3 289 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 LY6LH3BQJ8 138 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 IGKV1D-12P01611 117 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 ZNF20P17024 532 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 TMEM11P17152 192 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 LMO1P25800 156 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 MYCNOSP40205 109 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 PTGFRP43088 359 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 ALDH3A2P51648 485 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 SNRPGP62308 76 aaKnown RBP9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 PDZK1IP1Q13113 114 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 C17orf58Q2M2W7 97 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 SLC25A30Q5SVS4 291 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 MEDAGQ5VYS4 303 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 LCNL1Q6ZST4 164 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 KCTD20Q7Z5Y7 419 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 DRAM1Q8N682 238 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 OR56B4Q8NH76 319 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 PP6455Q8WZ26 134 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 CORO2AQ92828 525 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 TOMM40LQ969M1 308 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 C10orf35Q96D05 121 aa9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 NR1H4Q96RI1 486 aaPredicted RBP9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 MCRIP2Q9BUT9 160 aaKnown RBP9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 PPIL3Q9H2H8 161 aaKnown RBP9.45□□□□□ -0.9
TRAFD1-205ENST00000548277 TAS2R3Q9NYW6 316 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms