RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 ISYNA1Q9NPH2 558 aa15.31■□□□□ 0.04
PRPF40B-206ENST00000547764 IL36GQ9NZH8 169 aa15.31■□□□□ 0.04
PRPF40B-206ENST00000547764 DSCAML1Q8TD84 2053 aa15.31■□□□□ 0.04
PRPF40B-206ENST00000547764 hADV38S2A0JD32 116 aa15.3■□□□□ 0.04
PRPF40B-206ENST00000547764 CLDN34H7C241 214 aa15.3■□□□□ 0.04
PRPF40B-206ENST00000547764 HOXA3O43365 443 aaPredicted RBP15.3■□□□□ 0.04
PRPF40B-206ENST00000547764 ZNF728P0DKX0 622 aa15.3■□□□□ 0.04
PRPF40B-206ENST00000547764 ERP29P30040 261 aaKnown RBP15.3■□□□□ 0.04
PRPF40B-206ENST00000547764 GP2P55259 537 aaKnown RBP15.3■□□□□ 0.04
PRPF40B-206ENST00000547764 P2RX3P56373 397 aa15.3■□□□□ 0.04
PRPF40B-206ENST00000547764 MLLT11Q13015 90 aaPredicted RBP15.3■□□□□ 0.04
PRPF40B-206ENST00000547764 IL13RA2Q14627 380 aa15.3■□□□□ 0.04
PRPF40B-206ENST00000547764 PIGYQ3MUY2 71 aa15.3■□□□□ 0.04
PRPF40B-206ENST00000547764 FAM27D1Q5T7N8 215 aa15.3■□□□□ 0.04
PRPF40B-206ENST00000547764 TMEM203Q969S6 136 aa15.3■□□□□ 0.04
PRPF40B-206ENST00000547764 MUL1Q969V5 352 aa15.3■□□□□ 0.04
PRPF40B-206ENST00000547764 ZMAT3Q9HA38 289 aaKnown RBP15.3■□□□□ 0.04
PRPF40B-206ENST00000547764 SF3B6Q9Y3B4 125 aaKnown RBP15.3■□□□□ 0.04
PRPF40B-206ENST00000547764 STAB1Q9NY15 2570 aa15.3■□□□□ 0.04
PRPF40B-206ENST00000547764 SC5DO75845 299 aa15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 CSTBP04080 98 aaKnown RBP15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 MELTFP08582 738 aa15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 CPEP16870 476 aa15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 SERPINA2P20848 420 aa15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 AESQ08117 197 aa15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 TBCEQ15813 527 aaPredicted RBP15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 ZNF782Q6ZMW2 699 aaPredicted RBP15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 CEACAM19Q7Z692 300 aa15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 LYPD6Q86Y78 171 aa15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 CDH26Q8IXH8 852 aa15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 OSR2Q8N2R0 312 aa15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 SLC25A28Q96A46 364 aa15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 ZNF714Q96N38 554 aa15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 MGLLQ99685 303 aa15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 HEXA-AS1Q9H8Q6 139 aa15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 ST3GAL6Q9Y274 331 aa15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 FAM96BQ9Y3D0 163 aa15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 LINC00312Q9Y6C7 94 aa15.29■□□□□ 0.04
PRPF40B-206ENST00000547764 TRAV24A0A0B4J272 114 aa15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 MEIOCA2RUB1 952 aa15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 ZNF780AO75290 641 aaPredicted RBP15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 CSN2P05814 226 aa15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 RNASE1P07998 156 aaKnown RBP15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 SAA4P35542 130 aa15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 GLIPR1P48060 266 aa15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 GABARAPL2P60520 117 aa15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 RPS25P62851 125 aaKnown RBP15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 ACTG1P63261 375 aa15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 SLC22A6Q4U2R8 563 aa15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 NHLRC3Q5JS37 347 aa15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 GLIPR1L1Q6UWM5 242 aa15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 NKAIN3Q8N8D7 197 aa15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 PPIL3Q9H2H8 161 aaKnown RBP15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 TCF7L1Q9HCS4 588 aa15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 ACOT13Q9NPJ3 140 aa15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 MRPS28Q9Y2Q9 187 aaKnown RBP15.28■□□□□ 0.04
PRPF40B-206ENST00000547764 A0A1W2PP11 408 aa15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 FUOMA2VDF0 154 aa15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 MEGF11A6BM72 1044 aa15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 HSPB6O14558 160 aa15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 RBP4P02753 201 aa15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 COX7A1P24310 79 aa15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 RBM11P57052 281 aaKnown RBP15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 ATXN7L3Q14CW9 347 aaPredicted RBP15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 PAN3Q58A45 887 aaKnown RBP15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 KRBOX4Q5JUW0 171 aa15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 ZNF367Q7RTV3 350 aa15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 LRRTM1Q86UE6 522 aa15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 OR4D6Q8NGJ1 314 aa15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 COQ2Q96H96 371 aa15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 PCDHB16Q9NRJ7 776 aa15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 TNFRSF19Q9NS68 423 aa15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 ING3Q9NXR8 418 aa15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 ZNF581Q9P0T4 197 aa15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 UBE2J1Q9Y385 318 aaPredicted RBP15.27■□□□□ 0.04
PRPF40B-206ENST00000547764 GEMIN2O14893 280 aaKnown RBP15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 MRPS14O60783 128 aaKnown RBP15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 FBP1P09467 338 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 UCHL1P09936 223 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 IGHV1-8P0DP01 117 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 GTF2F2P13984 249 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 SRMP19623 302 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 EMX1Q04741 257 aaPredicted RBP15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 GPR176Q14439 515 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 TRAM1Q15629 374 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 MIDNQ504T8 468 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 HSD17B12Q53GQ0 312 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 AWAT2Q6E213 333 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 TMEM91Q6ZNR0 172 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 TRAPPC6BQ86SZ2 158 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 LDLRAD3Q86YD5 345 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 TMEM86BQ8N661 226 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 C17orf50Q8WW18 174 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 SSMEM1Q8WWF3 244 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 PHYHIPQ92561 330 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 GCDHQ92947 438 aaPredicted RBP15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 UQCC2Q9BRT2 126 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 YTHDF1Q9BYJ9 559 aaKnown RBP15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 KIAA2026Q5HYC2 2103 aa15.26■□□□□ 0.03
PRPF40B-206ENST00000547764 TRGV10A0A0A0MS01 117 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms