RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 PARP16Q8N5Y8 322 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 OR52I1Q8NGK6 324 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 APH1BQ8WW43 257 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 PDCD1LG2Q9BQ51 273 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 ZNF286AQ9HBT8 521 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 TAS2R3Q9NYW6 316 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 DPM3Q9P2X0 92 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 LOC100130705A0A1B0GUX0 176 aa10.68□□□□□ -0.7
CPSF6-204ENST00000547486 ODAMA1E959 279 aa10.68□□□□□ -0.7
CPSF6-204ENST00000547486 SULT1B1O43704 296 aa10.68□□□□□ -0.7
CPSF6-204ENST00000547486 FADS2O95864 444 aaKnown RBP10.68□□□□□ -0.7
CPSF6-204ENST00000547486 CGB3P0DN86 165 aa10.68□□□□□ -0.7
CPSF6-204ENST00000547486 CGB7P0DN87 165 aa10.68□□□□□ -0.7
CPSF6-204ENST00000547486 GTF2A1P52655 376 aaPredicted RBP10.68□□□□□ -0.7
CPSF6-204ENST00000547486 EMX1Q04741 257 aaPredicted RBP10.68□□□□□ -0.7
CPSF6-204ENST00000547486 C17orf58Q2M2W7 97 aa10.68□□□□□ -0.7
CPSF6-204ENST00000547486 KRBOX4Q5JUW0 171 aa10.68□□□□□ -0.7
CPSF6-204ENST00000547486 OR52W1Q6IF63 320 aa10.68□□□□□ -0.7
CPSF6-204ENST00000547486 RTN4RL2Q86UN3 420 aa10.68□□□□□ -0.7
CPSF6-204ENST00000547486 SERPINA12Q8IW75 414 aa10.68□□□□□ -0.7
CPSF6-204ENST00000547486 OR5D14Q8NGL3 314 aa10.68□□□□□ -0.7
CPSF6-204ENST00000547486 OR5AK2Q8NH90 309 aa10.68□□□□□ -0.7
CPSF6-204ENST00000547486 RGP1Q92546 391 aaPredicted RBP10.68□□□□□ -0.7
CPSF6-204ENST00000547486 PPIL3Q9H2H8 161 aaKnown RBP10.68□□□□□ -0.7
CPSF6-204ENST00000547486 GAL3ST2Q9H3Q3 398 aa10.68□□□□□ -0.7
CPSF6-204ENST00000547486 RHOFQ9HBH0 211 aa10.68□□□□□ -0.7
CPSF6-204ENST00000547486 MRPS18AQ9NVS2 196 aaKnown RBP10.68□□□□□ -0.7
CPSF6-204ENST00000547486 FAM118AQ9NWS6 357 aa10.68□□□□□ -0.7
CPSF6-204ENST00000547486 DSCAML1Q8TD84 2053 aa10.68□□□□□ -0.7
CPSF6-204ENST00000547486 FUOMA2VDF0 154 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 LY6LH3BQJ8 138 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 AMY1AP04745 511 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 AMY2AP04746 511 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 CSN2P05814 226 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 HCKP08631 526 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 LIMS3P0CW19 117 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 LIMS4P0CW20 117 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 CD34P28906 385 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 RAB40BQ12829 278 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 ATXN7L3Q14CW9 347 aaPredicted RBP10.67□□□□□ -0.7
CPSF6-204ENST00000547486 SMN1Q16637 294 aaKnown RBP10.67□□□□□ -0.7
CPSF6-204ENST00000547486 OXLD1Q5BKU9 147 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 ZNF691Q5VV52 312 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 LPCAT4Q643R3 524 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 XAF1Q6GPH4 301 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 ZNF529Q6P280 563 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 NDUFA11Q86Y39 141 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 CHST4Q8NCG5 386 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 OR51A2Q8NGJ7 313 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 STMN2Q93045 179 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 MRPL48Q96GC5 212 aaKnown RBP10.67□□□□□ -0.7
CPSF6-204ENST00000547486 Q96MT0 163 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 NR1H4Q96RI1 486 aaPredicted RBP10.67□□□□□ -0.7
CPSF6-204ENST00000547486 C9orf16Q9BUW7 83 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 S100A14Q9HCY8 104 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 INPP5EQ9NRR6 644 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 DHDHQ9UQ10 334 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 PCDHGB5Q9Y5G0 923 aa10.67□□□□□ -0.7
CPSF6-204ENST00000547486 A0A087X0M5 115 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 TRAV24A0A0B4J272 114 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 A0A1B0GX30 115 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 SH2D7A6NKC9 451 aaPredicted RBP10.66□□□□□ -0.7
CPSF6-204ENST00000547486 TMEM212A6NML5 194 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 LEUTXA8MZ59 168 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 BUB1B-PAK6H3BSN5 160 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 GABRPO00591 440 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 HSPB6O14558 160 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 MPZL2O60487 215 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 PEX14O75381 377 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 WBP4O75554 376 aaKnown RBP10.66□□□□□ -0.7
CPSF6-204ENST00000547486 PTGFRP43088 359 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 VDAC2P45880 294 aaPredicted RBP10.66□□□□□ -0.7
CPSF6-204ENST00000547486 SOX2P48431 317 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 GBX2P52951 348 aaPredicted RBP10.66□□□□□ -0.7
CPSF6-204ENST00000547486 CD83Q01151 205 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 ZSCAN26Q16670 478 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 TCTEX1D4Q5JR98 221 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 TPTE2P1Q5T6R2 138 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 ELP2Q6IA86 826 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 CCDC121Q6ZUS5 278 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 OR5AU1Q8NGC0 362 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 OR51T1Q8NGJ9 327 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 ZNF596Q8TC21 504 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 R3HDM4Q96D70 268 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 ZNF581Q9P0T4 197 aa10.66□□□□□ -0.7
CPSF6-204ENST00000547486 RPL36Q9Y3U8 105 aaKnown RBP10.66□□□□□ -0.7
CPSF6-204ENST00000547486 KBTBD11-OT1A0A1B0GTJ5 212 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 ZNF729A6NN14 1252 aaPredicted RBP10.65□□□□□ -0.7
CPSF6-204ENST00000547486 H0YJX3 145 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 CCDC159P0C7I6 412 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 NFYBP25208 207 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 BRS3P32247 399 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 MTNR1BP49286 362 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 ETV1P50549 477 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 HLA-DRB5Q30154 266 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 ARSJQ5FYB0 599 aaPredicted RBP10.65□□□□□ -0.7
CPSF6-204ENST00000547486 C10orf99Q6UWK7 81 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 SATL1Q86VE3 508 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 PQLC1Q8N2U9 271 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 PXT1Q8NFP0 134 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms