RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 RPL15P61313 204 aaKnown RBP9.68□□□□□ -0.86
YBX3-217ENST00000546164 FOXL1Q12952 345 aa9.68□□□□□ -0.86
YBX3-217ENST00000546164 GPR50Q13585 617 aa9.68□□□□□ -0.86
YBX3-217ENST00000546164 EDDM3AQ14507 147 aa9.68□□□□□ -0.86
YBX3-217ENST00000546164 C12orf54Q6X4T0 127 aa9.68□□□□□ -0.86
YBX3-217ENST00000546164 SATL1Q86VE3 508 aa9.68□□□□□ -0.86
YBX3-217ENST00000546164 LYPD6Q86Y78 171 aa9.68□□□□□ -0.86
YBX3-217ENST00000546164 MS4A15Q8N5U1 240 aa9.68□□□□□ -0.86
YBX3-217ENST00000546164 ORAI1Q96D31 301 aa9.68□□□□□ -0.86
YBX3-217ENST00000546164 AJUBAQ96IF1 538 aa9.68□□□□□ -0.86
YBX3-217ENST00000546164 ZNF714Q96N38 554 aa9.68□□□□□ -0.86
YBX3-217ENST00000546164 OR5M11Q96RB7 305 aa9.68□□□□□ -0.86
YBX3-217ENST00000546164 ZNRD1Q9P1U0 126 aa9.68□□□□□ -0.86
YBX3-217ENST00000546164 MAGEA13PA6NCF6 341 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 DEGS1O15121 323 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 RGS10O43665 173 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 ZNF780AO75290 641 aaPredicted RBP9.67□□□□□ -0.86
YBX3-217ENST00000546164 IGHV4-59P01825 116 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 IGHV1-8P0DP01 117 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 PAX5Q02548 391 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 RSU1Q15404 277 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 AANATQ16613 207 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 UNQ9370/PRO34162Q6UXP9 181 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 PRSS48Q7RTY5 328 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 PNKDQ8N490 385 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 BEND2Q8NDZ0 799 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 OR11H6Q8NGC7 330 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 CORO2AQ92828 525 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 ZNF184Q99676 751 aaPredicted RBP9.67□□□□□ -0.86
YBX3-217ENST00000546164 CHIAQ9BZP6 476 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 FAM192AQ9GZU8 254 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 METTL9Q9H1A3 318 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 DPAGT1Q9H3H5 408 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 NCOR1P1Q9H4R4 102 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 IFT22Q9H7X7 185 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 ISYNA1Q9NPH2 558 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 UBE2J1Q9Y385 318 aaPredicted RBP9.67□□□□□ -0.86
YBX3-217ENST00000546164 DSCAML1Q8TD84 2053 aa9.67□□□□□ -0.86
YBX3-217ENST00000546164 TRAV24A0A0B4J272 114 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 A0A1W2PPK0 400 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 A0A1W2PRD5 423 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 A0A1W2PRF3 423 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 A0A1W2PRM7 423 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 FAM181BA6NEQ2 426 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 FAM90A8PA6NJQ4 464 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 ODF3BA8MYP8 253 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 SC5DO75845 299 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 CDRT1O95170 752 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 PAHP00439 452 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 KCNJ3P48549 501 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 TPBGQ13641 420 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 MED22Q15528 200 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 AWAT1Q58HT5 328 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 RBM48Q5RL73 367 aaKnown RBP9.66□□□□□ -0.86
YBX3-217ENST00000546164 ZNF782Q6ZMW2 699 aaPredicted RBP9.66□□□□□ -0.86
YBX3-217ENST00000546164 LINC00596Q86U02 117 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 TPRX1Q8N7U7 411 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 NKAIN3Q8N8D7 197 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 OR13D1Q8NGV5 346 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 OR10K1Q8NGX5 313 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 DYRK2Q92630 601 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 COQ2Q96H96 371 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 CNBD2Q96M20 576 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 NKX3-1Q99801 234 aaPredicted RBP9.66□□□□□ -0.86
YBX3-217ENST00000546164 MEGF9Q9H1U4 602 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 PPA2Q9H2U2 334 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 PCDHB16Q9NRJ7 776 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 TAS2R3Q9NYW6 316 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 BLOC1S6Q9UL45 172 aa9.66□□□□□ -0.86
YBX3-217ENST00000546164 TRGV10A0A0A0MS01 117 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 ODAMA1E959 279 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 MEGF11A6BM72 1044 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 CLPXO76031 633 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 HTR3BO95264 441 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 COX7A1P24310 79 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 GLIPR1P48060 266 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 RBM11P57052 281 aaKnown RBP9.65□□□□□ -0.86
YBX3-217ENST00000546164 SCN1BQ07699 218 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 AESQ08117 197 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 MLLT11Q13015 90 aaPredicted RBP9.65□□□□□ -0.86
YBX3-217ENST00000546164 GPR176Q14439 515 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 TAF9Q16594 264 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 PIGYQ3MUY2 71 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 ACSM3Q53FZ2 586 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 ZNF626Q68DY1 528 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 OSR2Q8N2R0 312 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 OR5R1Q8NH85 324 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 PHYHIPQ92561 330 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 UFD1Q92890 307 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 MRPS24Q96EL2 167 aaKnown RBP9.65□□□□□ -0.86
YBX3-217ENST00000546164 S100A13Q99584 98 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 UQCC2Q9BRT2 126 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 GAL3ST2Q9H3Q3 398 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 VPREB3Q9UKI3 123 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 ING4Q9UNL4 249 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 ST3GAL6Q9Y274 331 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 TBL2Q9Y4P3 447 aaKnown RBP9.65□□□□□ -0.86
YBX3-217ENST00000546164 SESN1Q9Y6P5 492 aa9.65□□□□□ -0.86
YBX3-217ENST00000546164 MEX3AA1L020 520 aaKnown RBP9.64□□□□□ -0.87
YBX3-217ENST00000546164 BTBD17A6NE02 478 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms