RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 PCDH15Q96QU1 1955 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 SHISA7A6NL88 538 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 ADAM20O43506 726 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 CYB5R3P00387 301 aaPredicted RBP12.29□□□□□ -0.44
SRP54-202ENST00000546080 CEACAM1P13688 526 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 FUT3P21217 361 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 IL2RGP31785 369 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 RND2P52198 227 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 PNRC1Q12796 327 aaPredicted RBP12.29□□□□□ -0.44
SRP54-202ENST00000546080 SHBQ15464 509 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 CXorf66Q5JRM2 361 aaPredicted RBP12.29□□□□□ -0.44
SRP54-202ENST00000546080 FAM69BQ5VUD6 431 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 ANKRD37Q7Z713 158 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 C17orf82Q86X59 251 aaPredicted RBP12.29□□□□□ -0.44
SRP54-202ENST00000546080 OSR2Q8N2R0 312 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 IL22RA1Q8N6P7 574 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 NFAM1Q8NET5 270 aaPredicted RBP12.29□□□□□ -0.44
SRP54-202ENST00000546080 OR2AE1Q8NHA4 323 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 RNF138Q8WVD3 245 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 CD207Q9UJ71 328 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 PITPNC1Q9UKF7 332 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 PTRH2Q9Y3E5 179 aaKnown RBP12.29□□□□□ -0.44
SRP54-202ENST00000546080 OR2J2O76002 312 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 PGA5P0DJD9 388 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 PTGDSP41222 190 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 ZNF124Q15973 351 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 SPIN3Q5JUX0 258 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 PHYHD1Q5SRE7 291 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 LHFPL2Q6ZUX7 228 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 TBC1D26Q86UD7 250 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 TMEM123Q8N131 208 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 OR10G3Q8NGC4 313 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 NABP1Q96AH0 204 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 RCC1LQ96I51 464 aaKnown RBP12.29□□□□□ -0.44
SRP54-202ENST00000546080 ATP5SQ99766 215 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 CRLF2Q9HC73 371 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 TMEM242Q9NWH2 141 aa12.29□□□□□ -0.44
SRP54-202ENST00000546080 TRANK1O15050 2925 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 A0A087WZY1 265 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 IGLV3-32A0A0A0MS00 114 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 CCDC163A0A0D9SF12 145 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 CCDC85CA6NKD9 419 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 SLC33A1O00400 549 aaPredicted RBP12.28□□□□□ -0.44
SRP54-202ENST00000546080 IGLV3-19P01714 112 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 MALLQ13021 153 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 ZNF154Q13106 437 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 OR8B8Q15620 311 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 LBHQ53QV2 105 aaPredicted RBP12.28□□□□□ -0.44
SRP54-202ENST00000546080 C10orf128Q5T292 105 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 FAM90A2PQ658T7 463 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 ODF3L1Q8IXM7 274 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 SELENOHQ8IZQ5 122 aaKnown RBP12.28□□□□□ -0.44
SRP54-202ENST00000546080 OR2M3Q8NG83 312 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 TMEM56Q96MV1 263 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 C2orf88Q9BSF0 95 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 RBM24Q9BX46 236 aaKnown RBP12.28□□□□□ -0.44
SRP54-202ENST00000546080 HIPK2Q9H2X6 1198 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 SMOC1Q9H4F8 434 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 FAM86C1Q9NVL1 165 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 DKKL1Q9UK85 242 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 ST3GAL6Q9Y274 331 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 TMEM56-RWDD3S4R434 201 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 A0A1B0GU03 582 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 LOC102725191A0A1B0GVB3 256 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 C9J4A7 227 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 MKRN2OSH3BPM6 223 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 TERTO14746 1132 aaKnown RBP12.28□□□□□ -0.44
SRP54-202ENST00000546080 PDCD6O75340 191 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 NXPH3O95157 252 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 FGF7P21781 194 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 TAS2R30P59541 319 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 HIST1H3AP68431 136 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 H3F3AP84243 136 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 PDCD1Q15116 288 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 SLC25A24Q6NUK1 477 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 OR5L2Q8NGL0 311 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 ZNF442Q9H7R0 627 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 CA14Q9ULX7 337 aa12.28□□□□□ -0.44
SRP54-202ENST00000546080 ZFP92A6NM28 416 aa12.27□□□□□ -0.45
SRP54-202ENST00000546080 MMP9P14780 707 aa12.27□□□□□ -0.45
SRP54-202ENST00000546080 PAX1P15863 534 aa12.27□□□□□ -0.45
SRP54-202ENST00000546080 GNRHRP30968 328 aa12.27□□□□□ -0.45
SRP54-202ENST00000546080 PRSS12P56730 875 aa12.27□□□□□ -0.45
SRP54-202ENST00000546080 IL24Q13007 206 aa12.27□□□□□ -0.45
SRP54-202ENST00000546080 EXT1Q16394 746 aa12.27□□□□□ -0.45
SRP54-202ENST00000546080 ZNF385CQ66K41 422 aaPredicted RBP12.27□□□□□ -0.45
SRP54-202ENST00000546080 PLXDC1Q8IUK5 500 aa12.27□□□□□ -0.45
SRP54-202ENST00000546080 DEFB119Q8N690 84 aa12.27□□□□□ -0.45
SRP54-202ENST00000546080 RLN3Q8WXF3 142 aa12.27□□□□□ -0.45
SRP54-202ENST00000546080 TMEM54Q969K7 222 aa12.27□□□□□ -0.45
SRP54-202ENST00000546080 IGHV1OR21-1A0A087WYE8 117 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 IGKV1-12A0A0C4DH73 117 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 DVL1O14640 695 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 PHOX2AO14813 284 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 DHHO43323 396 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 TMEM50AO95807 157 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 IGKV1D-12P01611 117 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 OPN1MWP04001 364 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 OPN1MW2P0DN77 364 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 OPN1MW3P0DN78 364 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms