RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 SNU13P55769 128 aaKnown RBP13.15□□□□□ -0.3
CPSF7-225ENST00000545934 ISL1P61371 349 aa13.15□□□□□ -0.3
CPSF7-225ENST00000545934 PDZK1IP1Q13113 114 aa13.15□□□□□ -0.3
CPSF7-225ENST00000545934 C12orf73Q69YU5 71 aa13.15□□□□□ -0.3
CPSF7-225ENST00000545934 UNQ9370/PRO34162Q6UXP9 181 aa13.15□□□□□ -0.3
CPSF7-225ENST00000545934 TFAP2CQ92754 450 aa13.15□□□□□ -0.3
CPSF7-225ENST00000545934 ADAT3Q96EY9 351 aaPredicted RBP13.15□□□□□ -0.3
CPSF7-225ENST00000545934 COQ2Q96H96 371 aa13.15□□□□□ -0.3
CPSF7-225ENST00000545934 PRRG3Q9BZD7 231 aa13.15□□□□□ -0.3
CPSF7-225ENST00000545934 EXOSC4Q9NPD3 245 aaKnown RBP13.15□□□□□ -0.3
CPSF7-225ENST00000545934 LOC107986453A0A1B0GWG9 222 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 A0A1W2PPI3 338 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 A0A1W2PQL4 384 aaPredicted RBP13.14□□□□□ -0.31
CPSF7-225ENST00000545934 METTL15A6NJ78 407 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 ZAR1LA6NP61 321 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 C3orf84H3BNL1 204 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 SH2D1BO14796 132 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 FGF16O43320 207 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 FKBP6O75344 327 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 SULT1C4O75897 302 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 KDM4BO94953 1096 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 CYB5AP00167 134 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 IGHG2P01859 326 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 SNRNP70P08621 437 aaKnown RBP13.14□□□□□ -0.31
CPSF7-225ENST00000545934 CALB2P22676 271 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 POU3F4P49335 361 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 CBX1P83916 185 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 KPNB1Q14974 876 aaKnown RBP13.14□□□□□ -0.31
CPSF7-225ENST00000545934 Q6P435 159 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 UTS2BQ765I0 119 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 GID4Q8IVV7 300 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 COMMD1Q8N668 190 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 KLHL30-AS1Q8NEE0 82 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 OR9G1Q8NH87 305 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 RAX2Q96IS3 184 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 KIRREL1Q96J84 757 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 PCDHB16Q9NRJ7 776 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 H2AFY2Q9P0M6 372 aaPredicted RBP13.14□□□□□ -0.31
CPSF7-225ENST00000545934 GSTK1Q9Y2Q3 226 aa13.14□□□□□ -0.31
CPSF7-225ENST00000545934 ZNF729A6NN14 1252 aaPredicted RBP13.13□□□□□ -0.31
CPSF7-225ENST00000545934 ZFPL1O95159 310 aa13.13□□□□□ -0.31
CPSF7-225ENST00000545934 OR2T7P0C7T2 308 aa13.13□□□□□ -0.31
CPSF7-225ENST00000545934 UBCP0CG48 685 aaKnown RBP13.13□□□□□ -0.31
CPSF7-225ENST00000545934 ATF1P18846 271 aa13.13□□□□□ -0.31
CPSF7-225ENST00000545934 EPHA2P29317 976 aa13.13□□□□□ -0.31
CPSF7-225ENST00000545934 KIR3DL2P43630 455 aa13.13□□□□□ -0.31
CPSF7-225ENST00000545934 GP2P55259 537 aaKnown RBP13.13□□□□□ -0.31
CPSF7-225ENST00000545934 MTCP1P56278 107 aa13.13□□□□□ -0.31
CPSF7-225ENST00000545934 LHFPL2Q6ZUX7 228 aa13.13□□□□□ -0.31
CPSF7-225ENST00000545934 ZNF695Q8IW36 515 aa13.13□□□□□ -0.31
CPSF7-225ENST00000545934 RDH10Q8IZV5 341 aa13.13□□□□□ -0.31
CPSF7-225ENST00000545934 OR4D6Q8NGJ1 314 aa13.13□□□□□ -0.31
CPSF7-225ENST00000545934 OR56B4Q8NH76 319 aa13.13□□□□□ -0.31
CPSF7-225ENST00000545934 TBX5Q99593 518 aa13.13□□□□□ -0.31
CPSF7-225ENST00000545934 ADI1Q9BV57 179 aa13.13□□□□□ -0.31
CPSF7-225ENST00000545934 NUDT19A8MXV4 375 aa13.12□□□□□ -0.31
CPSF7-225ENST00000545934 SLC33A1O00400 549 aaPredicted RBP13.12□□□□□ -0.31
CPSF7-225ENST00000545934 PRKACBP22694 351 aa13.12□□□□□ -0.31
CPSF7-225ENST00000545934 GNGT1P63211 74 aa13.12□□□□□ -0.31
CPSF7-225ENST00000545934 KRBOX4Q5JUW0 171 aa13.12□□□□□ -0.31
CPSF7-225ENST00000545934 DRAM1Q8N682 238 aa13.12□□□□□ -0.31
CPSF7-225ENST00000545934 TOMM40LQ969M1 308 aa13.12□□□□□ -0.31
CPSF7-225ENST00000545934 UTP4Q969X6 686 aaKnown RBP13.12□□□□□ -0.31
CPSF7-225ENST00000545934 RPEQ96AT9 228 aa13.12□□□□□ -0.31
CPSF7-225ENST00000545934 SPSB1Q96BD6 273 aa13.12□□□□□ -0.31
CPSF7-225ENST00000545934 OPALINQ96PE5 141 aa13.12□□□□□ -0.31
CPSF7-225ENST00000545934 PPIL3Q9H2H8 161 aaKnown RBP13.12□□□□□ -0.31
CPSF7-225ENST00000545934 LINC00574Q9H8X3 128 aa13.12□□□□□ -0.31
CPSF7-225ENST00000545934 RHOFQ9HBH0 211 aa13.12□□□□□ -0.31
CPSF7-225ENST00000545934 WARS2Q9UGM6 360 aaKnown RBP13.12□□□□□ -0.31
CPSF7-225ENST00000545934 LINC00527Q9UJ94 153 aa13.12□□□□□ -0.31
CPSF7-225ENST00000545934 DNAH1Q9P2D7 4330 aa13.12□□□□□ -0.31
CPSF7-225ENST00000545934 STAB2Q8WWQ8 2551 aa13.12□□□□□ -0.31
CPSF7-225ENST00000545934 KBTBD11-OT1A0A1B0GTJ5 212 aa13.11□□□□□ -0.31
CPSF7-225ENST00000545934 TCRBV3S1A0A5B6 114 aa13.11□□□□□ -0.31
CPSF7-225ENST00000545934 SERPINE3A8MV23 424 aa13.11□□□□□ -0.31
CPSF7-225ENST00000545934 J3QR06 171 aa13.11□□□□□ -0.31
CPSF7-225ENST00000545934 MITFO75030 526 aaPredicted RBP13.11□□□□□ -0.31
CPSF7-225ENST00000545934 TMEM11P17152 192 aa13.11□□□□□ -0.31
CPSF7-225ENST00000545934 SLC35B1P78383 322 aa13.11□□□□□ -0.31
CPSF7-225ENST00000545934 DIAPH2-AS1Q14236 149 aa13.11□□□□□ -0.31
CPSF7-225ENST00000545934 RBM39Q14498 530 aaKnown RBP13.11□□□□□ -0.31
CPSF7-225ENST00000545934 STPG2Q8N412 459 aa13.11□□□□□ -0.31
CPSF7-225ENST00000545934 CHST4Q8NCG5 386 aa13.11□□□□□ -0.31
CPSF7-225ENST00000545934 DUX3Q96PT4 197 aa13.11□□□□□ -0.31
CPSF7-225ENST00000545934 IL4I1Q96RQ9 567 aa13.11□□□□□ -0.31
CPSF7-225ENST00000545934 MBOAT4Q96T53 435 aa13.11□□□□□ -0.31
CPSF7-225ENST00000545934 THTPAQ9BU02 230 aa13.11□□□□□ -0.31
CPSF7-225ENST00000545934 AMMECR1Q9Y4X0 333 aaPredicted RBP13.11□□□□□ -0.31
CPSF7-225ENST00000545934 LINC01548A6NM66 108 aa13.1□□□□□ -0.31
CPSF7-225ENST00000545934 CCL24O00175 119 aa13.1□□□□□ -0.31
CPSF7-225ENST00000545934 ATP8B1O43520 1251 aa13.1□□□□□ -0.31
CPSF7-225ENST00000545934 MT-ND2P03891 347 aa13.1□□□□□ -0.31
CPSF7-225ENST00000545934 ISG15P05161 165 aa13.1□□□□□ -0.31
CPSF7-225ENST00000545934 HTR1FP30939 366 aa13.1□□□□□ -0.31
CPSF7-225ENST00000545934 LUMP51884 338 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-225ENST00000545934 EBI3Q14213 229 aa13.1□□□□□ -0.31
CPSF7-225ENST00000545934 ATXN7L3Q14CW9 347 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-225ENST00000545934 CDK5R1Q15078 307 aa13.1□□□□□ -0.31
CPSF7-225ENST00000545934 SLC35E3Q7Z769 313 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms