RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 BOD1Q96IK1 185 aa5.6□□□□□ -1.51
SNHG1-225ENST00000545920 SGCZQ96LD1 299 aa5.6□□□□□ -1.51
SNHG1-225ENST00000545920 YPEL4Q96NS1 127 aa5.6□□□□□ -1.51
SNHG1-225ENST00000545920 SPACA5Q96QH8 159 aa5.6□□□□□ -1.51
SNHG1-225ENST00000545920 RASL10BQ96S79 203 aa5.6□□□□□ -1.51
SNHG1-225ENST00000545920 ADAT1Q9BUB4 502 aaKnown RBP5.6□□□□□ -1.51
SNHG1-225ENST00000545920 ULBP2Q9BZM5 246 aa5.6□□□□□ -1.51
SNHG1-225ENST00000545920 TMEM222Q9H0R3 208 aa5.6□□□□□ -1.51
SNHG1-225ENST00000545920 C11orf1Q9H5F2 150 aa5.6□□□□□ -1.51
SNHG1-225ENST00000545920 ELL3Q9HB65 397 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-225ENST00000545920 LYRM2Q9NU23 88 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-225ENST00000545920 PLEK2Q9NYT0 353 aa5.6□□□□□ -1.51
SNHG1-225ENST00000545920 ZNF319Q9P2F9 582 aa5.6□□□□□ -1.51
SNHG1-225ENST00000545920 AK3Q9UIJ7 227 aa5.6□□□□□ -1.51
SNHG1-225ENST00000545920 MPDZO75970 2070 aa5.6□□□□□ -1.51
SNHG1-225ENST00000545920 DNAH12Q6ZR08 3092 aa5.6□□□□□ -1.51
SNHG1-225ENST00000545920 ADAMTS9Q9P2N4 1935 aa5.6□□□□□ -1.51
SNHG1-225ENST00000545920 F5P12259 2224 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 ZNF816-ZNF321PA0A0X1KG74 233 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 C3orf85A0A1B0GTC6 90 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 A0A1W2PP11 408 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 ZNF729A6NN14 1252 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-225ENST00000545920 C17orf51A8MQB3 221 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 SEC14L6B5MCN3 397 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 C9JQL5 133 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 F5H5K5 113 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 MPPED1O15442 326 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 SYNGR3O43761 229 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 SOX15O60248 233 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 CBR3O75828 277 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 OR2C1O95371 312 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 NRASP01111 189 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 IGLV1-40P01703 118 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 TK1P04183 234 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 SNRNP70P08621 437 aaKnown RBP5.59□□□□□ -1.51
SNHG1-225ENST00000545920 COX5BP10606 129 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 FAHP16930 419 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 PI3P19957 117 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 VDAC1P21796 283 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 CDAP32320 146 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 CD200P41217 278 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 NKX2-1P43699 371 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-225ENST00000545920 CDX1P47902 265 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-225ENST00000545920 RBM11P57052 281 aaKnown RBP5.59□□□□□ -1.51
SNHG1-225ENST00000545920 TAS2R30P59541 319 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 RAC3P60763 192 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 VAMP2P63027 116 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 EWSR1Q01844 656 aaKnown RBP eCLIP5.59□□□□□ -1.51
SNHG1-225ENST00000545920 FABP9Q0Z7S8 132 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 TRA2AQ13595 282 aaKnown RBP eCLIP5.59□□□□□ -1.51
SNHG1-225ENST00000545920 IL11RAQ14626 422 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 SHHQ15465 462 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 MPV17LQ2QL34 196 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 C1orf189Q5VU69 101 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 SP5Q6BEB4 398 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-225ENST00000545920 SLC22A25Q6T423 547 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 C6orf201Q7Z4U5 140 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 C1QL2Q7Z5L3 287 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 DPPA2Q7Z7J5 298 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 CXorf67Q86X51 503 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-225ENST00000545920 WDFY1Q8IWB7 410 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 WDSUB1Q8N9V3 476 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 OR10G3Q8NGC4 313 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 OR5D13Q8NGL4 314 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 OR1F12Q8NHA8 337 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 HPSE2Q8WWQ2 592 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 NAT6Q93015 286 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 ERGIC1Q969X5 290 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 SGK3Q96BR1 496 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 MUCL1Q96DR8 90 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 TVP23CQ96ET8 276 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 REEP6Q96HR9 211 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 BTF3L4Q96K17 158 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 GNRHR2Q96P88 292 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 RAB40CQ96S21 281 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 P2RX4Q99571 388 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 NUDT22Q9BRQ3 303 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 NIPSNAP3BQ9BS92 247 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 CTDSP1Q9GZU7 261 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 TOLLIPQ9H0E2 274 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 SMOC1Q9H4F8 434 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 NIT2Q9NQR4 276 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 GSN-AS1Q9NRJ2 163 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 PARPBPQ9NWS1 579 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 TREM2Q9NZC2 230 aa5.59□□□□□ -1.51
SNHG1-225ENST00000545920 CHCHD2Q9Y6H1 151 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-225ENST00000545920 ATG2AQ2TAZ0 1938 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 PCNTO95613 3336 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 A0A1B0GU03 582 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 FAM90A27PA6NNH2 459 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 C2CD4DB7Z1M9 353 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 H0Y980 276 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 RPL36A-HNRNPH2H7BZ11 118 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 MASP2O00187 686 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 AGPAT2O15120 278 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 BCAT2O15382 392 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-225ENST00000545920 NME2P1O60361 137 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 SCRG1O75711 98 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 TUSC2O75896 110 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 OR2J2O76002 312 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms