RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 ZC3H12DA2A288 527 aaKnown RBP7.58□□□□□ -1.2
CLIP1-218ENST00000545889 SPRY1O43609 319 aaPredicted RBP7.58□□□□□ -1.2
CLIP1-218ENST00000545889 PNPP00491 289 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 RBP4P02753 201 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 GIPP09681 153 aaPredicted RBP7.58□□□□□ -1.2
CLIP1-218ENST00000545889 ZNF883P0CG24 379 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 DAOP14920 347 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 FABP4P15090 132 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 NKX2-1P43699 371 aaPredicted RBP7.58□□□□□ -1.2
CLIP1-218ENST00000545889 FMODQ06828 376 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 EGR3Q06889 387 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 ATP1A1-AS1Q5TC04 95 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 C1QL3Q5VWW1 255 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 CBLN3Q6UW01 205 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 SEZ6L2Q6UXD5 910 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 TMEM251Q8N6I4 163 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 FLVCR1-AS1Q8TAF5 88 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 SPSB1Q96BD6 273 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 ACY3Q96HD9 319 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 C4orf45Q96LM5 186 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 ALX4Q9H161 411 aaPredicted RBP7.58□□□□□ -1.2
CLIP1-218ENST00000545889 SF3B6Q9Y3B4 125 aaKnown RBP7.58□□□□□ -1.2
CLIP1-218ENST00000545889 C9orf172C9J069 976 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 MGMTP16455 207 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 FUT3P21217 361 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 CD80P33681 288 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 TESK1Q15569 626 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 INO80CQ6PI98 192 aaPredicted RBP7.58□□□□□ -1.2
CLIP1-218ENST00000545889 FAM214BQ7L5A3 538 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 GPR32P1Q8NGA4 272 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 DVL3Q92997 716 aaPredicted RBP7.58□□□□□ -1.2
CLIP1-218ENST00000545889 PIMREGQ9BSJ6 248 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 SF3B5Q9BWJ5 86 aaKnown RBP7.58□□□□□ -1.2
CLIP1-218ENST00000545889 CACFD1Q9UGQ2 172 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 FANCMQ8IYD8 2048 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 AQP7P3A6NL99 342 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 HLA-DOBP13765 273 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 CTSSP25774 331 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 TAS2R45P59539 299 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 PSG6Q00889 435 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 MCHR2Q969V1 340 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 ABHD17AQ96GS6 310 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 RAB33BQ9H082 229 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 RNF115Q9Y4L5 304 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 LIPGQ9Y5X9 500 aa7.58□□□□□ -1.2
CLIP1-218ENST00000545889 ADAM10O14672 748 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 HPNP05981 417 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 CELA2AP08217 269 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 SULT1A3P0DMM9 295 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 SULT1A4P0DMN0 295 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 ACKR3P25106 362 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 FCGR2CP31995 323 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 MTNR1BP49286 362 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 C21orf58P58505 322 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 SURF2Q15527 256 aaPredicted RBP7.57□□□□□ -1.2
CLIP1-218ENST00000545889 OR52I1Q8NGK6 324 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 ZNF2Q9BSG1 426 aaPredicted RBP7.57□□□□□ -1.2
CLIP1-218ENST00000545889 REG4Q9BYZ8 158 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 SEBOXQ9HB31 216 aaPredicted RBP7.57□□□□□ -1.2
CLIP1-218ENST00000545889 PTPN13Q12923 2485 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 DEFB108AA8MXU0 73 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 SDCBPO00560 298 aaPredicted RBP7.57□□□□□ -1.2
CLIP1-218ENST00000545889 OR7C2O60412 319 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 DFFBO76075 338 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 OR5H8P0DN80 308 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 FGF5P12034 268 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 HSD17B11Q8NBQ5 300 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 OR10P1Q8NGE3 313 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 OR2G2Q8NGZ5 317 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 FOXD3Q9UJU5 478 aaPredicted RBP7.57□□□□□ -1.2
CLIP1-218ENST00000545889 IGKV3-7A0A075B6H7 116 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 A0A0B4J2A0 478 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 OR5B21A6NL26 309 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 MAGEB4O15481 346 aaPredicted RBP7.57□□□□□ -1.2
CLIP1-218ENST00000545889 ST8SIA3O43173 380 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 ONECUT2O95948 504 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 SMIM10L1P0DMW3 83 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 CPN1P15169 458 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 ASCL1P50553 236 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 FUT7Q11130 342 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 ZNF266Q14584 549 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 REC114Q7Z4M0 266 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 MUC20Q8N307 709 aaPredicted RBP7.57□□□□□ -1.2
CLIP1-218ENST00000545889 NANOGP1Q8N7R0 232 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 OR52L2PQ8NGH6 319 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 OR13D1Q8NGV5 346 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 WDR89Q96FK6 387 aaPredicted RBP7.57□□□□□ -1.2
CLIP1-218ENST00000545889 SMIM10Q96HG1 83 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 ZNF75AQ96N20 296 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 TAAR6Q96RI8 345 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 TLNRD1Q9H1K6 362 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 SHPKQ9UHJ6 478 aa7.57□□□□□ -1.2
CLIP1-218ENST00000545889 TMEM235A6NFC5 223 aa7.56□□□□□ -1.2
CLIP1-218ENST00000545889 AQP8O94778 261 aa7.56□□□□□ -1.2
CLIP1-218ENST00000545889 NTN1O95631 604 aa7.56□□□□□ -1.2
CLIP1-218ENST00000545889 IGHV3-13P01766 116 aa7.56□□□□□ -1.2
CLIP1-218ENST00000545889 IGHV3-7P01780 117 aa7.56□□□□□ -1.2
CLIP1-218ENST00000545889 SMIM17P0DL12 118 aa7.56□□□□□ -1.2
CLIP1-218ENST00000545889 ATF1P18846 271 aa7.56□□□□□ -1.2
CLIP1-218ENST00000545889 MVDP53602 400 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms