RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 DGCR6LQ9BY27 220 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 KLK15Q9H2R5 256 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 PCDHB16Q9NRJ7 776 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 C19orf73Q9NVV2 129 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.28□□□□□ -1.24
CHD4-212ENST00000545083 GTF2A1LQ9UNN4 478 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 TNCP24821 2201 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 IGHV3-72A0A0B4J1Y9 119 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 ODAMA1E959 279 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 NCBP2LA6PVI3 153 aaKnown RBP7.27□□□□□ -1.25
CHD4-212ENST00000545083 H3BSH0 61 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 J3QR06 171 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 OVOL1O14753 267 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 ARPC2O15144 300 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 MAGEB4O15481 346 aaPredicted RBP7.27□□□□□ -1.25
CHD4-212ENST00000545083 PRODHO43272 600 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 MRPL3P09001 348 aaKnown RBP7.27□□□□□ -1.25
CHD4-212ENST00000545083 OR8U8P0C7N1 319 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 PRKACAP17612 351 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 PTGFRP43088 359 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 POU3F4P49335 361 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 ROM1Q03395 351 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 ZNF616Q08AN1 781 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 EBI3Q14213 229 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 ZNF146Q15072 292 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 ZNF829Q3KNS6 432 aaPredicted RBP7.27□□□□□ -1.25
CHD4-212ENST00000545083 PLEKHG7Q6ZR37 379 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 CATSPERDQ86XM0 798 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 ENTHD1Q8IYW4 607 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 ZNF679Q8IYX0 411 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 ELMOD2Q8IZ81 293 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 FAM58AQ8N1B3 248 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 Q8N6K4 173 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 OR4D6Q8NGJ1 314 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 TEX47Q8TBZ9 253 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 EAF1Q96JC9 268 aaPredicted RBP7.27□□□□□ -1.25
CHD4-212ENST00000545083 HRASLS5Q96KN8 279 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 NSMCE2Q96MF7 247 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 MROQ9BYG7 248 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 SPAG4Q9NPE6 437 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 LIN7CQ9NUP9 197 aaKnown RBP7.27□□□□□ -1.25
CHD4-212ENST00000545083 ING3Q9NXR8 418 aa7.27□□□□□ -1.25
CHD4-212ENST00000545083 TRBV2A0A0J9YWF9 115 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 MAGEA13PA6NCF6 341 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 DHRS7CA6NNS2 312 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 HMGB1P1B2RPK0 211 aaPredicted RBP7.26□□□□□ -1.25
CHD4-212ENST00000545083 LOC110117498-PIK3R3F6TDL0 507 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 ZNF254O75437 659 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 OR2H2O95918 312 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 CGB3P0DN86 165 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 CGB7P0DN87 165 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 CCL1P22362 96 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 RAB7AP51149 207 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 FUT6P51993 359 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 RIDAP52758 137 aaKnown RBP7.26□□□□□ -1.25
CHD4-212ENST00000545083 SLURP1P55000 103 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 CDC42P60953 191 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 RPS7P62081 194 aaKnown RBP7.26□□□□□ -1.25
CHD4-212ENST00000545083 RUNX1Q01196 453 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 MADCAM1Q13477 382 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 HAGHQ16775 308 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 MICAQ29983 383 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 BCL2L15Q5TBC7 163 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 HAPLN4Q86UW8 402 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 OR8H3Q8N146 312 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 FAM71E2Q8N5Q1 922 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 ZNF491Q8N8L2 437 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 DLX4Q92988 240 aaPredicted RBP7.26□□□□□ -1.25
CHD4-212ENST00000545083 KCTD7Q96MP8 289 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 APOL4Q9BPW4 351 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 SPATA25Q9BR10 227 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 GON7Q9BXV9 100 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 YIPF3Q9GZM5 350 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 PPIL3Q9H2H8 161 aaKnown RBP7.26□□□□□ -1.25
CHD4-212ENST00000545083 PLSCR3Q9NRY6 295 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 KIAA1456Q9P272 454 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 GLS2Q9UI32 602 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 MAGEL2Q9UJ55 1249 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 OR52A1Q9UKL2 312 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 IKZF2Q9UKS7 526 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 PSG11Q9UQ72 335 aa7.26□□□□□ -1.25
CHD4-212ENST00000545083 AMMECR1Q9Y4X0 333 aaPredicted RBP7.26□□□□□ -1.25
CHD4-212ENST00000545083 KBTBD11-OT1A0A1B0GTJ5 212 aa7.25□□□□□ -1.25
CHD4-212ENST00000545083 A0A1W2PPE3 182 aa7.25□□□□□ -1.25
CHD4-212ENST00000545083 FUOMA2VDF0 154 aa7.25□□□□□ -1.25
CHD4-212ENST00000545083 CCDC182A6NF36 153 aa7.25□□□□□ -1.25
CHD4-212ENST00000545083 ZNF729A6NN14 1252 aaPredicted RBP7.25□□□□□ -1.25
CHD4-212ENST00000545083 A8MZ25 164 aa7.25□□□□□ -1.25
CHD4-212ENST00000545083 H3BN98 237 aa7.25□□□□□ -1.25
CHD4-212ENST00000545083 HSD17B1P14061 328 aa7.25□□□□□ -1.25
CHD4-212ENST00000545083 MAGEA2P43356 314 aa7.25□□□□□ -1.25
CHD4-212ENST00000545083 REG1BP48304 166 aa7.25□□□□□ -1.25
CHD4-212ENST00000545083 GNG10P50151 68 aa7.25□□□□□ -1.25
CHD4-212ENST00000545083 APOFQ13790 326 aa7.25□□□□□ -1.25
CHD4-212ENST00000545083 GINS1Q14691 196 aa7.25□□□□□ -1.25
CHD4-212ENST00000545083 ATXN7L3Q14CW9 347 aaPredicted RBP7.25□□□□□ -1.25
CHD4-212ENST00000545083 ODF4Q2M2E3 257 aa7.25□□□□□ -1.25
CHD4-212ENST00000545083 C4orf46Q504U0 113 aa7.25□□□□□ -1.25
CHD4-212ENST00000545083 KRBOX4Q5JUW0 171 aa7.25□□□□□ -1.25
CHD4-212ENST00000545083 SPIN3Q5JUX0 258 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms