RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 GPR176Q14439 515 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 LRRC75BQ2VPJ9 315 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 DDI2Q5TDH0 399 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 OLFML2AQ68BL7 652 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 ASCL4Q6XD76 172 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 TRAPPC6BQ86SZ2 158 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 CDH26Q8IXH8 852 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 PNKDQ8N490 385 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 Q8NFD4 153 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 OR4S1Q8NGB4 309 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 OR11H6Q8NGC7 330 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 OR52N4Q8NGI2 321 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 OR51T1Q8NGJ9 327 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 CORO2AQ92828 525 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 MALSU1Q96EH3 234 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 CDCA4Q9BXL8 241 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 FAM192AQ9GZU8 254 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 CHST6Q9GZX3 395 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 FKBP14Q9NWM8 211 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 OR6C3Q9NZP0 311 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 C1RLQ9NZP8 487 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 IL36RNQ9UBH0 155 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 FOXJ3Q9UPW0 622 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 CLPSL1A2RUU4 121 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 VGLL3A8MV65 326 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 H0YHG0 523 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 SLC33A1O00400 549 aaPredicted RBP9.61□□□□□ -0.87
HDAC4-216ENST00000544989 GABRPO00591 440 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 CSTBP04080 98 aaKnown RBP9.61□□□□□ -0.87
HDAC4-216ENST00000544989 ARG1P05089 322 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 COX7A1P24310 79 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 C21orf33P30042 268 aaPredicted RBP9.61□□□□□ -0.87
HDAC4-216ENST00000544989 DLX1P56177 255 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 PAX5Q02548 391 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 SCN1BQ07699 218 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 TAF9Q16594 264 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 NHLRC3Q5JS37 347 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 C6orf141Q5SZD1 244 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 MINOS1Q5TGZ0 78 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 ZNF626Q68DY1 528 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 Q6P435 159 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 CRIP3Q6Q6R5 217 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 ZNF782Q6ZMW2 699 aaPredicted RBP9.61□□□□□ -0.87
HDAC4-216ENST00000544989 RTN4RL2Q86UN3 420 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 MS4A15Q8N5U1 240 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 NANOGP1Q8N7R0 232 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 OR51A2Q8NGJ7 313 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 CREB3L1Q96BA8 519 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 PGLYRP3Q96LB9 341 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 SSX3Q99909 188 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 BARHL1Q9BZE3 327 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 IFT22Q9H7X7 185 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 NKX1-2Q9UD57 310 aaPredicted RBP9.61□□□□□ -0.87
HDAC4-216ENST00000544989 TPRKBQ9Y3C4 175 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 SIRT4Q9Y6E7 314 aaPredicted RBP9.61□□□□□ -0.87
HDAC4-216ENST00000544989 MINOS1-NBL1R4GNA1 71 aa9.61□□□□□ -0.87
HDAC4-216ENST00000544989 PRKDCP78527 4128 aaKnown RBP9.6□□□□□ -0.87
HDAC4-216ENST00000544989 TRBV5-7A0A0A0MS05 114 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 ODAMA1E959 279 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 MEGF11A6BM72 1044 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 FAM90A8PA6NJQ4 464 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 ODF3BA8MYP8 253 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 LALBAP00709 142 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 CDK1P06493 297 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 CALCBP10092 127 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 IGFBP3P17936 291 aaPredicted RBP9.6□□□□□ -0.87
HDAC4-216ENST00000544989 CELP19835 753 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 MDKP21741 143 aaPredicted RBP9.6□□□□□ -0.87
HDAC4-216ENST00000544989 ARHGDIBP52566 201 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 AQP4P55087 323 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 PRB3Q04118 309 aaPredicted RBP9.6□□□□□ -0.87
HDAC4-216ENST00000544989 DOC2BQ14184 412 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 PAN3Q58A45 887 aaKnown RBP9.6□□□□□ -0.87
HDAC4-216ENST00000544989 KRBOX4Q5JUW0 171 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 LAIR2Q6ISS4 152 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 C11orf88Q6PI97 169 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 HEPN1Q6WQI6 88 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 NKAIN3Q8N8D7 197 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 ZNF565Q8N9K5 539 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 OR4D6Q8NGJ1 314 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 ZNF596Q8TC21 504 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 CLEC7AQ9BXN2 247 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 ANKRD60Q9BZ19 345 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 TMEM133Q9H2Q1 129 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 PPA2Q9H2U2 334 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 C16orf95Q9H693 158 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 SPACA1Q9HBV2 294 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 ABCB10Q9NRK6 738 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 PITPNC1Q9UKF7 332 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 DSCAML1Q8TD84 2053 aa9.6□□□□□ -0.87
HDAC4-216ENST00000544989 IGHV2-26A0A0B4J1V2 119 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 ZNF729A6NN14 1252 aaPredicted RBP9.59□□□□□ -0.87
HDAC4-216ENST00000544989 PTGES3LE9PB15 166 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 H3BUX3 64 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 TSPAN9O75954 239 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 HTR3BO95264 441 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 GTF2F2P13984 249 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 MYF6P23409 242 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 OMGP23515 440 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 RPS11P62280 158 aaKnown RBP eCLIP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms