RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 TCP1P17987 556 aaKnown RBP2.4□□□□□ -2.02
SCFD1-207ENST00000544052 PMCHP20382 165 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 TEAD1P28347 426 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 PCK1P35558 622 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 ACTR1BP42025 376 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 CSNK1A1P48729 337 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 UCNP55089 124 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 UBE2IP63279 158 aaKnown RBP2.4□□□□□ -2.02
SCFD1-207ENST00000544052 TPM4P67936 248 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 CTAG1AP78358 180 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 PAFAH1B3Q15102 231 aaKnown RBP2.4□□□□□ -2.02
SCFD1-207ENST00000544052 MRPL21Q7Z2W9 205 aaKnown RBP2.4□□□□□ -2.02
SCFD1-207ENST00000544052 RBM45Q8IUH3 476 aaKnown RBP2.4□□□□□ -2.02
SCFD1-207ENST00000544052 CHST4Q8NCG5 386 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 GPR26Q8NDV2 337 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 OR5AR1Q8NGP9 310 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 FAM210BQ96KR6 192 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 C9orf72Q96LT7 481 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 OR2M4Q96R27 311 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 LYSMD1Q96S90 227 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 CTRCQ99895 268 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 CHRNA10Q9GZZ6 450 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 RAB1BQ9H0U4 201 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 SPNS1Q9H2V7 528 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 PARVAQ9NVD7 372 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 TFR2Q9UP52 801 aa2.4□□□□□ -2.02
SCFD1-207ENST00000544052 SVILO95425 2214 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 A0A096LNJ9 63 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 IGHV3-74A0A0B4J1X5 117 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 H7C0C1 242 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 KCNK1O00180 336 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 GMDSO60547 372 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 RAD1O60671 282 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 BCHEP06276 602 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 USF1P22415 310 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-207ENST00000544052 MARCKSL1P49006 195 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 SPINT3P49223 89 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 CCNG1P51959 295 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 PSMD4P55036 377 aaKnown RBP2.4□□□□□ -2.03
SCFD1-207ENST00000544052 SKP1P63208 163 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 EIF3IQ13347 325 aaKnown RBP2.4□□□□□ -2.03
SCFD1-207ENST00000544052 ZNF235Q14590 738 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 IGFBP7Q16270 282 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 GCSAMLQ5JQS6 135 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 ADNP2Q6IQ32 1131 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 FAM92BQ6ZTR7 304 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 ABHD12BQ7Z5M8 362 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-207ENST00000544052 PCP2Q8IVA1 136 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 KIF2BQ8N4N8 673 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 CBR4Q8N4T8 237 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 ATPAF2Q8N5M1 289 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 C11orf72Q8NBR9 251 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 OR10G4Q8NGN3 311 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 OR13C9Q8NGT0 318 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 ANGPTL6Q8NI99 470 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 TCP10LQ8TDR4 215 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 ISOC2Q96AB3 205 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 RNF145Q96MT1 663 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 OLFM3Q96PB7 478 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 ALS2CR12Q96Q35 445 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 CYTH2Q99418 400 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 GOLPH3Q9H4A6 298 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 NOX3Q9HBY0 568 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 ISYNA1Q9NPH2 558 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 MS4A12Q9NXJ0 267 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 EURLQ9NYK6 297 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 ADA2Q9NZK5 511 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 CD300AQ9UGN4 299 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 HYOU1Q9Y4L1 999 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 SAR1BQ9Y6B6 198 aa2.4□□□□□ -2.03
SCFD1-207ENST00000544052 CSMD2Q7Z408 3487 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 DIDO1Q9BTC0 2240 aaKnown RBP2.39□□□□□ -2.03
SCFD1-207ENST00000544052 TRPC5OSA6NMA1 111 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 ANGPTL7O43827 346 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 PROSCO94903 275 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 CD3GP09693 182 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 PGA5P0DJD9 388 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 IL32P24001 234 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 HSPA9P38646 679 aaKnown RBP2.39□□□□□ -2.03
SCFD1-207ENST00000544052 VSX2P58304 361 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-207ENST00000544052 HERVK_113P61574 105 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 PPP1CBP62140 327 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 PPIDQ08752 370 aaKnown RBP2.39□□□□□ -2.03
SCFD1-207ENST00000544052 CDC20Q12834 499 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 DGCR6Q14129 220 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 ZNF470Q6ECI4 717 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 TMEM205Q6UW68 189 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 VKORC1L1Q8N0U8 176 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 MRGPRFQ96AM1 343 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 IMP4Q96G21 291 aaKnown RBP2.39□□□□□ -2.03
SCFD1-207ENST00000544052 ZNF681Q96N22 645 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 RNF157Q96PX1 679 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 DDA1Q9BW61 102 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 TPK1Q9H3S4 243 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 RBM22Q9NW64 420 aaKnown RBP eCLIP2.39□□□□□ -2.032e-7■■■■□ 25.7
SCFD1-207ENST00000544052 SLC39A1Q9NY26 324 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 NACAE9PAV3 2078 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 ITPR2Q14571 2701 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 TEX15Q9BXT5 2789 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 EML6Q6ZMW3 1958 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms