RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 ADAD2Q8NCV1 583 aaKnown RBP13.67□□□□□ -0.22
CHD4-210ENST00000544040 OR10D3Q8NH80 312 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 OR2A5Q96R48 311 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 MARVELD1Q9BSK0 173 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 TMEM167BQ9NRX6 74 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 P2RY1P47900 373 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 OR8B12Q8NGG6 310 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 HMSDA8MTL9 139 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 NTN1O95631 604 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 C21orf58P58505 322 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 ANKRD55Q3KP44 614 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 C7orf77A4D0Y5 90 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 ZNF552Q9H707 407 aaPredicted RBP13.66□□□□□ -0.22
CHD4-210ENST00000544040 F12P00748 615 aaPredicted RBP13.66□□□□□ -0.22
CHD4-210ENST00000544040 SCGB1A1P11684 91 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 RIGQ13278 110 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 HLA-BQ31612 363 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 MYOZ3Q8TDC0 251 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 ST6GAL2Q96JF0 529 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 STARD10Q9Y365 291 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 PLPP3O14495 311 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 TMPRSS2O15393 492 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 KLK10O43240 276 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 HOXB3P14651 431 aaPredicted RBP13.66□□□□□ -0.22
CHD4-210ENST00000544040 PRICKLE4Q2TBC4 344 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 LBHQ53QV2 105 aaPredicted RBP13.66□□□□□ -0.22
CHD4-210ENST00000544040 ANKRD37Q7Z713 158 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 GAPTQ8N292 157 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 ADAT3Q96EY9 351 aaPredicted RBP13.66□□□□□ -0.22
CHD4-210ENST00000544040 OR6C3Q9NZP0 311 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 CTLA4P16410 223 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 OR4A47Q6IF82 309 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 Q6ZS52 159 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 OR11H7Q8NGC8 314 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 ASCL3Q9NQ33 180 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 H3BQ15 152 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 SYNGR2O43760 224 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 PCMT1P22061 227 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 COL19A1Q14993 1142 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 Q6ZNB5 142 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 KMT5CQ86Y97 462 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 MOGAT1Q96PD6 335 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 HSPB8Q9UJY1 196 aa13.66□□□□□ -0.22
CHD4-210ENST00000544040 AMMECR1Q9Y4X0 333 aaPredicted RBP13.66□□□□□ -0.22
CHD4-210ENST00000544040 hADV38S2A0JD32 116 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 SNRPCP09234 159 aaKnown RBP13.65□□□□□ -0.22
CHD4-210ENST00000544040 KLF3P57682 345 aaPredicted RBP13.65□□□□□ -0.22
CHD4-210ENST00000544040 PNRC1Q12796 327 aaPredicted RBP13.65□□□□□ -0.22
CHD4-210ENST00000544040 RNPS1Q15287 305 aaKnown RBP13.65□□□□□ -0.22
CHD4-210ENST00000544040 GUSBP11Q6P575 273 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 IGSF23A1L1A6 192 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 SRP14P37108 136 aaKnown RBP13.65□□□□□ -0.22
CHD4-210ENST00000544040 PPP1CAP62136 330 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 THYN1Q9P016 225 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 AUP1Q9Y679 476 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 JMJD6Q6NYC1 403 aaPredicted RBP13.65□□□□□ -0.22
CHD4-210ENST00000544040 MRPL24Q96A35 216 aaKnown RBP13.65□□□□□ -0.22
CHD4-210ENST00000544040 VSIG4Q9Y279 399 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 C2CD4DB7Z1M9 353 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 M0QZK8 103 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 CDC42EP2O14613 210 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 GGCTO75223 188 aaKnown RBP13.65□□□□□ -0.22
CHD4-210ENST00000544040 RNASE1P07998 156 aaKnown RBP13.65□□□□□ -0.22
CHD4-210ENST00000544040 OR1N2Q8NGR9 330 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 CXXC4Q9H2H0 198 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 MBPP02686 304 aaPredicted RBP13.65□□□□□ -0.22
CHD4-210ENST00000544040 CD99P14209 185 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 LGALS7P47929 136 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 PKIAP61925 76 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 MSRB3Q8IXL7 192 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 ZNF707Q96C28 371 aaPredicted RBP13.65□□□□□ -0.22
CHD4-210ENST00000544040 VAX2Q9UIW0 290 aa13.65□□□□□ -0.22
CHD4-210ENST00000544040 TRDCB7Z8K6 153 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 NKX2-2O95096 273 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 MRPS11P82912 194 aaKnown RBP13.64□□□□□ -0.23
CHD4-210ENST00000544040 OR4S2Q8NH73 311 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 GNG7O60262 68 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 SMPD2O60906 423 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 TMEM255AQ5JRV8 349 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 MRM2Q9UI43 246 aaKnown RBP13.64□□□□□ -0.23
CHD4-210ENST00000544040 IGHV5-51A0A0C4DH38 117 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 DEDDO75618 318 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 SRSF5Q13243 272 aaKnown RBP13.64□□□□□ -0.23
CHD4-210ENST00000544040 C3AR1Q16581 482 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 ZNF770Q6IQ21 691 aaPredicted RBP13.64□□□□□ -0.23
CHD4-210ENST00000544040 OR4X1Q8NH49 305 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 CTSDP07339 412 aaPredicted RBP13.64□□□□□ -0.23
CHD4-210ENST00000544040 SOSTQ9BQB4 213 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 ANGPTL4Q9BY76 406 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 CCL28Q9NRJ3 127 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 SPTY2D1-AS1A0A0U1RR47 76 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 K7EQS6 105 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 TAS2R60P59551 318 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 RNFT1Q5M7Z0 435 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 TMEM240Q5SV17 173 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 TRAV39A0A0B4J263 110 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 CDK2AP1O14519 115 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 CTSVO60911 334 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 C10orf113Q5VZT2 155 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 C16orf82Q7Z2V1 217 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms