RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 PATZ1Q9HBE1 687 aaKnown RBP7.77□□□□□ -1.17
VPS13D-212ENST00000543766 TMED3Q9Y3Q3 217 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 OTOL1A6NHN0 477 aaPredicted RBP7.77□□□□□ -1.17
VPS13D-212ENST00000543766 TNFSF13O75888 250 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 KIR2DS4P43632 304 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 IER3P46695 156 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 PGFP49763 221 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 CRYBA2P53672 197 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 NIPAL3Q6P499 406 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 Q7L0L9 218 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 TMPRSS11BQ86T26 416 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 C1QL4Q86Z23 238 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 FBXL15Q9H469 300 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 TAF9BQ9HBM6 251 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 ASIC5Q9NY37 505 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 KIR2DL5BA0A0G2JN68 375 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 KIR2DL5BA0A0G2JPC4 375 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 LOC285095A0A1B0GVY8 99 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 K7EQS6 105 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 P2RX6O15547 441 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 CREBL2O60519 120 aaPredicted RBP7.77□□□□□ -1.17
VPS13D-212ENST00000543766 GALR3O60755 368 aaPredicted RBP7.77□□□□□ -1.17
VPS13D-212ENST00000543766 ORM1P02763 201 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 THY1P04216 161 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 NBL1P41271 181 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 VEGFBP49765 207 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 ERVK11-1P61568 191 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 MFGE8Q08431 387 aaPredicted RBP7.77□□□□□ -1.17
VPS13D-212ENST00000543766 HMGN3Q15651 99 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 TMEM241Q24JQ0 296 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 TIGITQ495A1 244 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 TMEM215Q68D42 235 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 KIR2DL5AQ8N109 375 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 PNKDQ8N490 385 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 NPWQ8N729 165 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 C1orf123Q9NWV4 160 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 PCTPQ9UKL6 214 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 CA1P00915 261 aaPredicted RBP7.76□□□□□ -1.17
VPS13D-212ENST00000543766 PPP1CAP62136 330 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 SHHQ15465 462 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 LYPD4Q6UWN0 246 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 CBLL1Q75N03 491 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 OR4A5Q8NH83 315 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 ZNF418Q8TF45 676 aaPredicted RBP7.76□□□□□ -1.17
VPS13D-212ENST00000543766 VOPP1Q96AW1 172 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 MALSU1Q96EH3 234 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 ADTRPQ96IZ2 230 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 CXorf36Q9H7Y0 433 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 FTSJ1Q9UET6 329 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 GTF3C1Q12789 2109 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 KIAA0100Q14667 2235 aaKnown RBP7.76□□□□□ -1.17
VPS13D-212ENST00000543766 SH2D7A6NKC9 451 aaPredicted RBP7.76□□□□□ -1.17
VPS13D-212ENST00000543766 MSTNO14793 375 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 DIRAS1O95057 198 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 HIST1H2ABP04908 130 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 NTSP30990 170 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 GABRA3P34903 492 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 SRPXP78539 464 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 ADIRFQ15847 76 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 HIST3H2AQ7L7L0 130 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 NOXO1Q8NFA2 376 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 OR5A2Q8NGI9 324 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 HIST1H2ACQ93077 130 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 TMEM106AQ96A25 262 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 TBL1YQ9BQ87 522 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 SMG9Q9H0W8 520 aaKnown RBP7.76□□□□□ -1.17
VPS13D-212ENST00000543766 FBXO4Q9UKT5 387 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 SOX21Q9Y651 276 aaPredicted RBP7.76□□□□□ -1.17
VPS13D-212ENST00000543766 TDRD15B5MCY1 1934 aaKnown RBP7.76□□□□□ -1.17
VPS13D-212ENST00000543766 CDH23Q9H251 3354 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 RPS20P60866 119 aaKnown RBP7.76□□□□□ -1.17
VPS13D-212ENST00000543766 SELENOWP63302 87 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 NSDHLQ15738 373 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 SPATA45Q537H7 98 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 SLC27A1Q6PCB7 646 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 SLC23A3Q6PIS1 610 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 ZNF683Q8IZ20 524 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 CLEC4CQ8WTT0 213 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 PBX4Q9BYU1 374 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 MMP26Q9NRE1 261 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 ST6GALNAC2Q9UJ37 374 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 DSPPQ9NZW4 1301 aa7.76□□□□□ -1.17
VPS13D-212ENST00000543766 A0A0U1RQV1 116 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 OR2M5A3KFT3 312 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 ZAR1LA6NP61 321 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 K7ESF4 209 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 CLDN11O75508 207 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 ZNF121P58317 390 aaPredicted RBP7.75□□□□□ -1.17
VPS13D-212ENST00000543766 SPHARQ15513 63 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 TTC32Q5I0X7 151 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 MEIG1Q5JSS6 88 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 GPR135Q8IZ08 494 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 RNF175Q8N4F7 328 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 GPR32P1Q8NGA4 272 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 PARP12Q9H0J9 701 aaKnown RBP7.75□□□□□ -1.17
VPS13D-212ENST00000543766 FNDC3AQ9Y2H6 1198 aaKnown RBP7.75□□□□□ -1.17
VPS13D-212ENST00000543766 NUP205Q92621 2012 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 TRAV24A0A0B4J272 114 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 M0R1X1 148 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 CHRM4P08173 479 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms