RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 DENRO43583 198 aaKnown RBP4.3□□□□□ -1.72
CLIP1-217ENST00000543205 SPRY3O43610 288 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 HTR1AP08908 422 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 PAX1P15863 534 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 PTH2RP49190 550 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 ART1P52961 327 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 UBE2V1Q13404 147 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 ZNF684Q5T5D7 378 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 LIPNQ5VXI9 398 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 LAIR2Q6ISS4 152 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 PRR27Q6MZM9 219 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 SYS1Q8N2H4 156 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 ZNF786Q8N393 782 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 PARP16Q8N5Y8 322 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 OR8G5Q8NG78 346 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 OR13F1Q8NGS4 319 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 KCNG3Q8TAE7 436 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 NDNFQ8TB73 568 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 HAVCR2Q8TDQ0 301 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 NEU4Q8WWR8 484 aaPredicted RBP4.3□□□□□ -1.72
CLIP1-217ENST00000543205 HARBI1Q96MB7 349 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 FOXC2Q99958 501 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 RHNO1Q9BSD3 238 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 TPK1Q9H3S4 243 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 ISG20L2Q9H9L3 353 aaKnown RBP4.3□□□□□ -1.72
CLIP1-217ENST00000543205 ACOXLQ9NUZ1 547 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 TMEM100Q9NV29 134 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 ZNF701Q9NV72 531 aaPredicted RBP4.3□□□□□ -1.72
CLIP1-217ENST00000543205 ZNF319Q9P2F9 582 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 ERVK-18Q9QC07 812 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 OR14J1Q9UGF5 321 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 NUFIP1Q9UHK0 495 aaKnown RBP4.3□□□□□ -1.72
CLIP1-217ENST00000543205 OR52A1Q9UKL2 312 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 TRAV26-1A0A087WT03 109 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 CXorf65A6NEN9 183 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 CD300LBA8K4G0 201 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 IQCF6A8MYZ5 107 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 MYL12BO14950 172 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 SRSF10O75494 262 aaKnown RBP4.29□□□□□ -1.72
CLIP1-217ENST00000543205 IGHV4-39P01824 125 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 CDK1P06493 297 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 ELANEP08246 267 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 LIMS3P0CW19 117 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 LIMS4P0CW20 117 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 ANOS1P23352 680 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 DDOSTP39656 456 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 PPT1P50897 306 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 MMP15P51511 669 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 EFNA4P52798 201 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 FAM3AP98173 230 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 ODF4Q2M2E3 257 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 TMEM255AQ5JRV8 349 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 CEP78Q5JTW2 689 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 RBM48Q5RL73 367 aaKnown RBP4.29□□□□□ -1.72
CLIP1-217ENST00000543205 TMEM268Q5VZI3 342 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 PLCXD3Q63HM9 321 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 KCTD8Q6ZWB6 473 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 LHFPL4Q7Z7J7 247 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 CATSPERDQ86XM0 798 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 ZCCHC24Q8N2G6 241 aaKnown RBP4.29□□□□□ -1.72
CLIP1-217ENST00000543205 FTMTQ8N4E7 242 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 CSNK2A3Q8NEV1 391 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 OR2Z1Q8NG97 314 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 OR13G1Q8NGZ3 307 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 ANGPTL6Q8NI99 470 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 OR51E1Q8TCB6 317 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 GTF3AQ92664 365 aaKnown RBP4.29□□□□□ -1.72
CLIP1-217ENST00000543205 RORBQ92753 470 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 RFT1Q96AA3 541 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 PELI1Q96FA3 418 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 LYZL4Q96KX0 146 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 SORCS2Q96PQ0 1159 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 MFFQ9GZY8 342 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 SLC22A4Q9H015 551 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 GPR84Q9NQS5 396 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 FKBP14Q9NWM8 211 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 ENPP5Q9UJA9 477 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 SLC22A13Q9Y226 551 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 ERGIC3Q9Y282 383 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 NOP16Q9Y3C1 178 aaKnown RBP4.29□□□□□ -1.72
CLIP1-217ENST00000543205 CELSR1Q9NYQ6 3014 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 ROS1P08922 2347 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 RAI1Q7Z5J4 1906 aaPredicted RBP4.29□□□□□ -1.72
CLIP1-217ENST00000543205 hCG_38984A0A1B0GV85 526 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 A0A1B0GVI7 797 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 M0QZ24 198 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 P2RY10O00398 339 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 NDUFS7O75251 213 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 IGHV1-46P01743 117 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 TTRP02766 147 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 CA6P23280 308 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 CRHBPP24387 322 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 C21orf33P30042 268 aaPredicted RBP4.29□□□□□ -1.72
CLIP1-217ENST00000543205 CCL8P80075 99 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 TNFAIP6P98066 277 aaPredicted RBP4.29□□□□□ -1.72
CLIP1-217ENST00000543205 OR8G1Q15617 311 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 WDR38Q5JTN6 314 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 OR2G6Q5TZ20 316 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 Q6ZR03 302 aa4.29□□□□□ -1.72
CLIP1-217ENST00000543205 PRSS35Q8N3Z0 413 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms