RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 CYC1P08574 325 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 TBPP20226 339 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 ARF1P84077 181 aaKnown RBP12.76□□□□□ -0.37
DDX55-209ENST00000542286 PEG10Q86TG7 708 aaKnown RBP12.76□□□□□ -0.37
DDX55-209ENST00000542286 SULF2Q8IWU5 870 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 NUDT16L1Q9BRJ7 211 aaKnown RBP12.76□□□□□ -0.37
DDX55-209ENST00000542286 C20orf24Q9BUV8 137 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 KPTNQ9Y664 436 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 CEP250Q9BV73 2442 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 GPR37O15354 613 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 SCGB1D2O95969 90 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 CST2P09228 141 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 CYCSP99999 105 aaKnown RBP12.76□□□□□ -0.37
DDX55-209ENST00000542286 ABLIM2Q6H8Q1 611 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 OR2A2Q6IF42 318 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 FAHD2BQ6P2I3 314 aaPredicted RBP12.76□□□□□ -0.37
DDX55-209ENST00000542286 BTNL8Q6UX41 500 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 OR11L1Q8NGX0 322 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 CPT1CQ8TCG5 803 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 FAHD2AQ96GK7 314 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 SF3B5Q9BWJ5 86 aaKnown RBP12.76□□□□□ -0.37
DDX55-209ENST00000542286 TM2D1Q9BX74 207 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 SMIM3Q9BZL3 60 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 METTL9Q9H1A3 318 aa12.76□□□□□ -0.37
DDX55-209ENST00000542286 M0R036 132 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 RBMXP38159 391 aaKnown RBP12.75□□□□□ -0.37
DDX55-209ENST00000542286 RBP2P50120 134 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 OR2M7Q8NG81 312 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 PARP12Q9H0J9 701 aaKnown RBP12.75□□□□□ -0.37
DDX55-209ENST00000542286 TUBA4BQ9H853 241 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 ST3GAL6Q9Y274 331 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 MRPL33O75394 65 aaKnown RBP12.75□□□□□ -0.37
DDX55-209ENST00000542286 NGFP01138 241 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 OR5H8P0DN80 308 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 ESPL1Q14674 2120 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 RPL7L1Q6DKI1 246 aaKnown RBP12.75□□□□□ -0.37
DDX55-209ENST00000542286 SLC25A26Q70HW3 274 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 KCNE4Q8WWG9 221 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 MRPL24Q96A35 216 aaKnown RBP12.75□□□□□ -0.37
DDX55-209ENST00000542286 IER2Q9BTL4 223 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 FGF23Q9GZV9 251 aaPredicted RBP12.75□□□□□ -0.37
DDX55-209ENST00000542286 C12orf49Q9H741 205 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 TAF9BQ9HBM6 251 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 UFSP2Q9NUQ7 469 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 RIF1Q5UIP0 2472 aaKnown RBP12.75□□□□□ -0.37
DDX55-209ENST00000542286 DIDO1Q9BTC0 2240 aaKnown RBP12.75□□□□□ -0.37
DDX55-209ENST00000542286 hCG_38984A0A1B0GV85 526 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 C5orf49A4QMS7 147 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 SLC34A2O95436 690 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 ARG1P05089 322 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 OR8U9P0C7N5 309 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 ALDH3B1P43353 468 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 TAS2R31P59538 309 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 OR1C1Q15619 314 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 PYY3Q5JQD4 70 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 EIF5AL1Q6IS14 154 aaKnown RBP12.75□□□□□ -0.37
DDX55-209ENST00000542286 SLC22A25Q6T423 547 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 OR8U1Q8NH10 309 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 GTF3AQ92664 365 aaKnown RBP12.75□□□□□ -0.37
DDX55-209ENST00000542286 ANXA10Q9UJ72 324 aa12.75□□□□□ -0.37
DDX55-209ENST00000542286 A0A1B0GV90 55 aa12.74□□□□□ -0.37
DDX55-209ENST00000542286 SERPINE3A8MV23 424 aa12.74□□□□□ -0.37
DDX55-209ENST00000542286 OR7C1O76099 320 aaPredicted RBP12.74□□□□□ -0.37
DDX55-209ENST00000542286 YIF1AO95070 293 aa12.74□□□□□ -0.37
DDX55-209ENST00000542286 MMP7P09237 267 aaPredicted RBP12.74□□□□□ -0.37
DDX55-209ENST00000542286 RAB5CP51148 216 aa12.74□□□□□ -0.37
DDX55-209ENST00000542286 TAS2R46P59540 309 aa12.74□□□□□ -0.37
DDX55-209ENST00000542286 DAZAP2Q15038 168 aaPredicted RBP12.74□□□□□ -0.37
DDX55-209ENST00000542286 PRSS54Q6PEW0 395 aa12.74□□□□□ -0.37
DDX55-209ENST00000542286 RGCCQ9H4X1 137 aa12.74□□□□□ -0.37
DDX55-209ENST00000542286 ZNF703Q9H7S9 590 aaPredicted RBP12.74□□□□□ -0.37
DDX55-209ENST00000542286 LIPGQ9Y5X9 500 aa12.74□□□□□ -0.37
DDX55-209ENST00000542286 LILRA1O75019 489 aa12.74□□□□□ -0.37
DDX55-209ENST00000542286 LHX2P50458 406 aa12.74□□□□□ -0.37
DDX55-209ENST00000542286 ZNF124Q15973 351 aa12.74□□□□□ -0.37
DDX55-209ENST00000542286 ABHD17BQ5VST6 288 aa12.74□□□□□ -0.37
DDX55-209ENST00000542286 OR56B2PQ8NGI1 322 aa12.74□□□□□ -0.37
DDX55-209ENST00000542286 ZNF488Q96MN9 340 aa12.74□□□□□ -0.37
DDX55-209ENST00000542286 AQP10Q96PS8 301 aa12.74□□□□□ -0.37
DDX55-209ENST00000542286 SLC5A7Q9GZV3 580 aa12.74□□□□□ -0.37
DDX55-209ENST00000542286 KIAA2026Q5HYC2 2103 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 A0A1W2PR80 420 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 SLC33A1O00400 549 aaPredicted RBP12.73□□□□□ -0.37
DDX55-209ENST00000542286 CYTIPO60759 359 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 SPEM2Q0P670 501 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 HMGN3Q15651 99 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 IAH1Q2TAA2 248 aaPredicted RBP12.73□□□□□ -0.37
DDX55-209ENST00000542286 ACTBL2Q562R1 376 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 CDPF1Q6NVV7 123 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 Q6ZRG5 221 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 ZNF383Q8NA42 475 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 OR5L1Q8NGL2 311 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 SLAMF9Q96A28 289 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 BSCL2Q96G97 398 aaPredicted RBP12.73□□□□□ -0.37
DDX55-209ENST00000542286 RHOVQ96L33 236 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 TTTY12Q9BZ98 90 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 LSM5Q9Y4Y9 91 aaKnown RBP12.73□□□□□ -0.37
DDX55-209ENST00000542286 MED12LQ86YW9 2145 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 WISP2O76076 250 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 CHATP28329 748 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms