RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 PP6455Q8WZ26 134 aa13.27□□□□□ -0.29
CNOT9-208ENST00000542068 ZNF845Q96IR2 970 aaPredicted RBP13.27□□□□□ -0.29
CNOT9-208ENST00000542068 CDX2Q99626 313 aaPredicted RBP13.27□□□□□ -0.29
CNOT9-208ENST00000542068 SRXN1Q9BYN0 137 aa13.27□□□□□ -0.29
CNOT9-208ENST00000542068 PRRG4Q9BZD6 226 aa13.27□□□□□ -0.29
CNOT9-208ENST00000542068 METTL1Q9UBP6 276 aaKnown RBP13.27□□□□□ -0.29
CNOT9-208ENST00000542068 KIAA2026Q5HYC2 2103 aa13.27□□□□□ -0.29
CNOT9-208ENST00000542068 IGKV1-12A0A0C4DH73 117 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 H3BQ15 152 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 HSD17B6O14756 317 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 IGKV1D-12P01611 117 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 HOXB1P14653 301 aaPredicted RBP13.26□□□□□ -0.29
CNOT9-208ENST00000542068 SPINK14Q6IE38 97 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 LINC00696Q6ZRV3 163 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 ZNF695Q8IW36 515 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 ABHD3Q8WU67 409 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 NTNG2Q96CW9 530 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 RAB39BQ96DA2 213 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 RHOVQ96L33 236 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 GGACTQ9BVM4 153 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 SCRT1Q9BWW7 348 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 EGLN1Q9GZT9 426 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 TOLLIPQ9H0E2 274 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 OR51M1Q9H341 326 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 POMT1Q9Y6A1 747 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 TPRP12270 2363 aaKnown RBP13.26□□□□□ -0.29
CNOT9-208ENST00000542068 TGIF2-C20orf24A0A0A6YYL0 155 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 IGSF23A1L1A6 192 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 S100PP25815 95 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 RNF212Q495C1 297 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 PLCXD3Q63HM9 321 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 OR5C1Q8NGR4 320 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 LOC400499M0QZD8 3231 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 CEP192Q8TEP8 1941 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 ZNF724A8MTY0 619 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 ZNF32P17041 273 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 ZNF133P52736 654 aaPredicted RBP13.26□□□□□ -0.29
CNOT9-208ENST00000542068 SLC16A14Q7RTX9 510 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 OR2C3Q8N628 320 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 CYB561D1Q8N8Q1 229 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 PAPOLGQ9BWT3 736 aaKnown RBP13.26□□□□□ -0.29
CNOT9-208ENST00000542068 TM2D1Q9BX74 207 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 ARHGAP21Q5T5U3 1957 aa13.26□□□□□ -0.29
CNOT9-208ENST00000542068 IGHV1-45A0A0A0MS14 117 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 FAM166BA8MTA8 275 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 TOX3O15405 576 aaPredicted RBP13.25□□□□□ -0.29
CNOT9-208ENST00000542068 RBP2P50120 134 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 CEACAM16Q2WEN9 425 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 OR2B11Q5JQS5 317 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 OR10D4PQ8NGN7 298 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 GINS3Q9BRX5 216 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 MED13Q9UHV7 2174 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 RBFOX3A6NFN3 312 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 ADAM20O43506 726 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 CXCL1P09341 107 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 LIFP15018 202 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 S100A2P29034 98 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 NKX2-1P43699 371 aaPredicted RBP13.25□□□□□ -0.29
CNOT9-208ENST00000542068 NPBWR2P48146 333 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 RND3P61587 244 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 PMS2CLQ68D20 193 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 MRPL14Q6P1L8 145 aaKnown RBP13.25□□□□□ -0.29
CNOT9-208ENST00000542068 SYT3Q9BQG1 590 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 ZNF286AQ9HBT8 521 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 TINAGQ9UJW2 476 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 PILRBQ9UKJ0 227 aa13.25□□□□□ -0.29
CNOT9-208ENST00000542068 WRBO00258 174 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 CYB5BO43169 146 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 NRASP01111 189 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 HLA-HP01893 362 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 COX6A1P12074 109 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 ZNF154Q13106 437 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 SPNS3Q6ZMD2 512 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 SLC25A26Q70HW3 274 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 S100PBPQ96BU1 408 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 SEBOXQ9HB31 216 aaPredicted RBP13.24□□□□□ -0.29
CNOT9-208ENST00000542068 V9GYS6 101 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 NBEAQ8NFP9 2946 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 ZIC3O60481 467 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 IGHV2-5P01817 119 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 PLA2G5P39877 138 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 DYNLT3P51808 116 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 ZNF385CQ66K41 422 aaPredicted RBP13.24□□□□□ -0.29
CNOT9-208ENST00000542068 ZNF383Q8NA42 475 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 UBALD1Q8TB05 177 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 TMEM171Q8WVE6 324 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 MSI2Q96DH6 328 aaKnown RBP13.24□□□□□ -0.29
CNOT9-208ENST00000542068 CALHM2Q9HA72 323 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 COLQQ9Y215 455 aaPredicted RBP13.24□□□□□ -0.29
CNOT9-208ENST00000542068 DSCR4P56555 118 aaPredicted RBP13.24□□□□□ -0.29
CNOT9-208ENST00000542068 DLK1P80370 383 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 MALLQ13021 153 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 CLEC12BQ2HXU8 276 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 ALKBH2Q6NS38 261 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 OSR2Q8N2R0 312 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 HPSE2Q8WWQ2 592 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 PLA2G3Q9NZ20 509 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 DOK5Q9P104 306 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 SEMA5BQ9P283 1151 aa13.24□□□□□ -0.29
CNOT9-208ENST00000542068 ZFP92A6NM28 416 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms