RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 RSU1Q15404 277 aa10.69□□□□□ -0.7
LTBR-208ENST00000541005 UNQ9370/PRO34162Q6UXP9 181 aa10.69□□□□□ -0.7
LTBR-208ENST00000541005 LYPD6Q86Y78 171 aa10.69□□□□□ -0.7
LTBR-208ENST00000541005 NKAIN3Q8N8D7 197 aa10.69□□□□□ -0.7
LTBR-208ENST00000541005 AJUBAQ96IF1 538 aa10.69□□□□□ -0.7
LTBR-208ENST00000541005 CNBD2Q96M20 576 aa10.69□□□□□ -0.7
LTBR-208ENST00000541005 FAM192AQ9GZU8 254 aa10.69□□□□□ -0.7
LTBR-208ENST00000541005 IFT22Q9H7X7 185 aa10.69□□□□□ -0.7
LTBR-208ENST00000541005 ISYNA1Q9NPH2 558 aa10.69□□□□□ -0.7
LTBR-208ENST00000541005 ZNRD1Q9P1U0 126 aa10.69□□□□□ -0.7
LTBR-208ENST00000541005 BLOC1S6Q9UL45 172 aa10.69□□□□□ -0.7
LTBR-208ENST00000541005 UBE2J1Q9Y385 318 aaPredicted RBP10.69□□□□□ -0.7
LTBR-208ENST00000541005 FUOMA2VDF0 154 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 DEGS1O15121 323 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 ZNF780AO75290 641 aaPredicted RBP10.68□□□□□ -0.7
LTBR-208ENST00000541005 CDRT1O95170 752 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 IGHV1-8P0DP01 117 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 IER3P46695 156 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 RBM11P57052 281 aaKnown RBP10.68□□□□□ -0.7
LTBR-208ENST00000541005 TPBGQ13641 420 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 MED22Q15528 200 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 TBCEQ15813 527 aaPredicted RBP10.68□□□□□ -0.7
LTBR-208ENST00000541005 C16orf87Q6PH81 154 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 LINC00596Q86U02 117 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 PNKDQ8N490 385 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 CORO2AQ92828 525 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 GCDHQ92947 438 aaPredicted RBP10.68□□□□□ -0.7
LTBR-208ENST00000541005 COQ2Q96H96 371 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 NKX3-1Q99801 234 aaPredicted RBP10.68□□□□□ -0.7
LTBR-208ENST00000541005 CHIAQ9BZP6 476 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 METTL9Q9H1A3 318 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 PPA2Q9H2U2 334 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 NCOR1P1Q9H4R4 102 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 FAM96BQ9Y3D0 163 aa10.68□□□□□ -0.7
LTBR-208ENST00000541005 TRAV24A0A0B4J272 114 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 A0A1W2PPK0 400 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 ODAMA1E959 279 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 MEIOCA2RUB1 952 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 MEGF11A6BM72 1044 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 ODF3BA8MYP8 253 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 CLPXO76031 633 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 KCNJ3P48549 501 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 GABARAPL2P60520 117 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 MLLT11Q13015 90 aaPredicted RBP10.67□□□□□ -0.7
LTBR-208ENST00000541005 GPR176Q14439 515 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 AANATQ16613 207 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 PIGYQ3MUY2 71 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 ACSM3Q53FZ2 586 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 TPRX1Q8N7U7 411 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 BEND2Q8NDZ0 799 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 OR11H6Q8NGC7 330 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 OR10K1Q8NGX5 313 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 PHYHIPQ92561 330 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 UFD1Q92890 307 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 UQCC2Q9BRT2 126 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 DPAGT1Q9H3H5 408 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 PCDHB16Q9NRJ7 776 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 TAS2R3Q9NYW6 316 aa10.67□□□□□ -0.7
LTBR-208ENST00000541005 TRGV10A0A0A0MS01 117 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 FAM90A8PA6NJQ4 464 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 DENRO43583 198 aaKnown RBP10.66□□□□□ -0.7
LTBR-208ENST00000541005 MRPS14O60783 128 aaKnown RBP10.66□□□□□ -0.7
LTBR-208ENST00000541005 HTR3BO95264 441 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 PAHP00439 452 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 IGHV4-59P01825 116 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 CPEP16870 476 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 COX7A1P24310 79 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 GP2P55259 537 aaKnown RBP10.66□□□□□ -0.7
LTBR-208ENST00000541005 SCN1BQ07699 218 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 AESQ08117 197 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 FOXL1Q12952 345 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 INSL4Q14641 139 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 TRAM1Q15629 374 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 MPV17LQ2QL34 196 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 PAN3Q58A45 887 aaKnown RBP10.66□□□□□ -0.7
LTBR-208ENST00000541005 AWAT1Q58HT5 328 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 KRBOX4Q5JUW0 171 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 LIPKQ5VXJ0 399 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 ZNF626Q68DY1 528 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 C12orf54Q6X4T0 127 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 ZNF782Q6ZMW2 699 aaPredicted RBP10.66□□□□□ -0.7
LTBR-208ENST00000541005 OSR2Q8N2R0 312 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 JAGN1Q8N5M9 183 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 OR13D1Q8NGV5 346 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 DYRK2Q92630 601 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 MRPS24Q96EL2 167 aaKnown RBP10.66□□□□□ -0.7
LTBR-208ENST00000541005 S100A13Q99584 98 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 TMED9Q9BVK6 235 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 MEGF9Q9H1U4 602 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 GAL3ST2Q9H3Q3 398 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 Q9H521 79 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 ST3GAL6Q9Y274 331 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 MRPS28Q9Y2Q9 187 aaKnown RBP10.66□□□□□ -0.7
LTBR-208ENST00000541005 RRP15Q9Y3B9 282 aaKnown RBP10.66□□□□□ -0.7
LTBR-208ENST00000541005 TBL2Q9Y4P3 447 aaKnown RBP10.66□□□□□ -0.7
LTBR-208ENST00000541005 SESN1Q9Y6P5 492 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 ANK2Q01484 3957 aa10.66□□□□□ -0.7
LTBR-208ENST00000541005 A0A1W2PRD5 423 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 A0A1W2PRF3 423 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 A0A1W2PRM7 423 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms