RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 TAF15Q92804 592 aaKnown RBP eCLIP13.77□□□□□ -0.21
CD9-209ENST00000540891 SLC25A28Q96A46 364 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 COQ2Q96H96 371 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 ZNF714Q96N38 554 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 NR1H4Q96RI1 486 aaPredicted RBP13.77□□□□□ -0.21
CD9-209ENST00000540891 TMED9Q9BVK6 235 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 CCDC90BQ9GZT6 254 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 ZNF581Q9P0T4 197 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 ING4Q9UNL4 249 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 SF3B6Q9Y3B4 125 aaKnown RBP13.77□□□□□ -0.21
CD9-209ENST00000540891 RRP15Q9Y3B9 282 aaKnown RBP13.77□□□□□ -0.21
CD9-209ENST00000540891 LINC00312Q9Y6C7 94 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 STAB1Q9NY15 2570 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 TRAV24A0A0B4J272 114 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 A0A1W2PP11 408 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 hADV38S2A0JD32 116 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 HTR3BO95264 441 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 RBP4P02753 201 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 MAS1P04201 325 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 COX7A1P24310 79 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 MAPK3P27361 379 aaPredicted RBP13.76□□□□□ -0.21
CD9-209ENST00000540891 IER3P46695 156 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 GLIPR1P48060 266 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 COMPP49747 757 aaPredicted RBP13.76□□□□□ -0.21
CD9-209ENST00000540891 AESQ08117 197 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 GPR50Q13585 617 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 TPBGQ13641 420 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 TMEM86BQ8N661 226 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 THRSPQ92748 146 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 CHIAQ9BZP6 476 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 METTL9Q9H1A3 318 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 PPIL3Q9H2H8 161 aaKnown RBP13.76□□□□□ -0.21
CD9-209ENST00000540891 ISYNA1Q9NPH2 558 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 TNFRSF19Q9NS68 423 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 ZNRD1Q9P1U0 126 aa13.76□□□□□ -0.21
CD9-209ENST00000540891 hCG_1809904A0A1W2PP81 198 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 A0A1W2PPE2 198 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 A0A1W2PR64 198 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 A0A1W2PRV1 198 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 MEIOCA2RUB1 952 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 MMP23AO75900 390 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 IGHV4-59P01825 116 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 FBP1P09467 338 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 IGHV1-8P0DP01 117 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 HKR1P10072 659 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 MLLT11Q13015 90 aaPredicted RBP13.75□□□□□ -0.21
CD9-209ENST00000540891 MIDNQ504T8 468 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 NHLRC3Q5JS37 347 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 LIPKQ5VXJ0 399 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 C16orf87Q6PH81 154 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 CDH26Q8IXH8 852 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 OSR2Q8N2R0 312 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 JAGN1Q8N5M9 183 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 OR4D6Q8NGJ1 314 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 SSMEM1Q8WWF3 244 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 UFD1Q92890 307 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 GCDHQ92947 438 aaPredicted RBP13.75□□□□□ -0.21
CD9-209ENST00000540891 MUL1Q969V5 352 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 HEXA-AS1Q9H8Q6 139 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 FAM96BQ9Y3D0 163 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 POMT1Q9Y6A1 747 aa13.75□□□□□ -0.21
CD9-209ENST00000540891 HSPB6O14558 160 aa13.74□□□□□ -0.21
CD9-209ENST00000540891 DENRO43583 198 aaKnown RBP13.74□□□□□ -0.21
CD9-209ENST00000540891 HSMCR30P0CW71 290 aa13.74□□□□□ -0.21
CD9-209ENST00000540891 SERPINA2P20848 420 aa13.74□□□□□ -0.21
CD9-209ENST00000540891 RBM11P57052 281 aaKnown RBP13.74□□□□□ -0.21
CD9-209ENST00000540891 RPS25P62851 125 aaKnown RBP13.74□□□□□ -0.21
CD9-209ENST00000540891 ATXN7L3Q14CW9 347 aaPredicted RBP13.74□□□□□ -0.21
CD9-209ENST00000540891 TBCEQ15813 527 aaPredicted RBP13.74□□□□□ -0.21
CD9-209ENST00000540891 LRRTM1Q86UE6 522 aa13.74□□□□□ -0.21
CD9-209ENST00000540891 CORO2AQ92828 525 aa13.74□□□□□ -0.21
CD9-209ENST00000540891 ING3Q9NXR8 418 aa13.74□□□□□ -0.21
CD9-209ENST00000540891 ST3GAL6Q9Y274 331 aa13.74□□□□□ -0.21
CD9-209ENST00000540891 MRPS28Q9Y2Q9 187 aaKnown RBP13.74□□□□□ -0.21
CD9-209ENST00000540891 UBE2J1Q9Y385 318 aaPredicted RBP13.74□□□□□ -0.21
CD9-209ENST00000540891 ANK2Q01484 3957 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 ODAMA1E959 279 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 ODF3BA8MYP8 253 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 GEMIN2O14893 280 aaKnown RBP13.73□□□□□ -0.21
CD9-209ENST00000540891 ZNF780AO75290 641 aaPredicted RBP13.73□□□□□ -0.21
CD9-209ENST00000540891 CPEP16870 476 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 TAF9Q16594 264 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 SLC22A6Q4U2R8 563 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 KRBOX4Q5JUW0 171 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 LDLRAD2Q5SZI1 272 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 GLIPR1L1Q6UWM5 242 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 TMEM91Q6ZNR0 172 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 CEACAM19Q7Z692 300 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 NKAIN3Q8N8D7 197 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 BEND2Q8NDZ0 799 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 TMEM203Q969S6 136 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 S100A13Q99584 98 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 MGLLQ99685 303 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 IFT22Q9H7X7 185 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 ACOT13Q9NPJ3 140 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 BLOC1S6Q9UL45 172 aa13.73□□□□□ -0.21
CD9-209ENST00000540891 FAM181BA6NEQ2 426 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 FAM90A8PA6NJQ4 464 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 CLPXO76031 633 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 CSTBP04080 98 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms