RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 TECTBQ96PL2 329 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 ZNF442Q9H7R0 627 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 PLEKHF2Q9H8W4 249 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 A0A1B0GV50 99 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 IGSF23A1L1A6 192 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 RBFOX3A6NFN3 312 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 IFNA17P01571 189 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 B4GALT1P15291 398 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 NQO2P16083 231 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 ATP6V0CP27449 155 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 CCL20P78556 96 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 IGSF11Q5DX21 431 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 PLCXD3Q63HM9 321 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 PIGCQ92535 297 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 HLA-CQ95604 372 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 PAPOLGQ9BWT3 736 aaKnown RBP10.6□□□□□ -0.71
NPC1-202ENST00000540608 SIT1Q9Y3P8 196 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 PUS1Q9Y606 427 aaKnown RBP eCLIP10.6□□□□□ -0.71
NPC1-202ENST00000540608 ZNF816-ZNF321PA0A0X1KG74 233 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 BTBD17A6NE02 478 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 GPR37O15354 613 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 OR2C1O95371 312 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 EIF2S3P41091 472 aaKnown RBP10.6□□□□□ -0.71
NPC1-202ENST00000540608 CARD18P57730 90 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 B3GALT5-AS1P59052 145 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 OR2B8PP59922 312 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 RPS23P62266 143 aaKnown RBP10.6□□□□□ -0.71
NPC1-202ENST00000540608 POLR2GP62487 172 aaKnown RBP eCLIP10.6□□□□□ -0.71
NPC1-202ENST00000540608 DAZAP2Q15038 168 aaPredicted RBP10.6□□□□□ -0.71
NPC1-202ENST00000540608 HIKESHIQ53FT3 197 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 SPSB3Q6PJ21 355 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 DPPA2Q7Z7J5 298 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 ZNF695Q8IW36 515 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 ABHD14BQ96IU4 210 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 SPIN2AQ99865 258 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 SPIN2BQ9BPZ2 258 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 OR2H1Q9GZK4 316 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 SLC25A31Q9H0C2 315 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 WNT5BQ9H1J7 359 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 OR51M1Q9H341 326 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 P4HTMQ9NXG6 502 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 UBE2J1Q9Y385 318 aaPredicted RBP10.6□□□□□ -0.71
NPC1-202ENST00000540608 ZNF724A8MTY0 619 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 IL11RAQ14626 422 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 HEPN1Q6WQI6 88 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 Q6ZS49 121 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 AAED1Q7RTV5 226 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 TBC1D26Q86UD7 250 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 RPS19BP1Q86WX3 136 aaKnown RBP10.6□□□□□ -0.71
NPC1-202ENST00000540608 SELENOHQ8IZQ5 122 aaKnown RBP10.6□□□□□ -0.71
NPC1-202ENST00000540608 IFI44Q8TCB0 444 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 UNKLQ9H9P5 680 aaKnown RBP10.6□□□□□ -0.71
NPC1-202ENST00000540608 LYRM2Q9NU23 88 aaPredicted RBP10.6□□□□□ -0.71
NPC1-202ENST00000540608 FAM86C1Q9NVL1 165 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 RFNGQ9Y644 331 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 KIAA1549Q9HCM3 1950 aa10.6□□□□□ -0.71
NPC1-202ENST00000540608 ZNF716A6NP11 495 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 PROB1E7EW31 1015 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 RPL36A-HNRNPH2H7BZ11 118 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 HSPA12AO43301 675 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 OR7C1O76099 320 aaPredicted RBP10.59□□□□□ -0.71
NPC1-202ENST00000540608 PCBD1P61457 104 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 RND3P61587 244 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 SRSF7Q16629 238 aaKnown RBP eCLIP10.59□□□□□ -0.71
NPC1-202ENST00000540608 WDR5BQ86VZ2 330 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 CALHM1Q8IU99 346 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 TMEM252Q8N6L7 170 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 Q8NFD4 153 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 FGFBP3Q8TAT2 258 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 ABHD14AQ9BUJ0 271 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 SLC7A10Q9NS82 523 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 CLN5O75503 358 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 KLF7O75840 302 aaPredicted RBP10.59□□□□□ -0.71
NPC1-202ENST00000540608 S100PP25815 95 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 MLF1P58340 268 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 TRIM61Q5EBN2 209 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 SP5Q6BEB4 398 aaPredicted RBP10.59□□□□□ -0.71
NPC1-202ENST00000540608 LURAP1LQ8IV03 231 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 ZFP62Q8NB50 900 aaPredicted RBP10.59□□□□□ -0.71
NPC1-202ENST00000540608 TMEM171Q8WVE6 324 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 KCNE4Q8WWG9 221 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 ALKBH3Q96Q83 286 aaPredicted RBP10.59□□□□□ -0.71
NPC1-202ENST00000540608 FOXB1Q99853 325 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 PILRBQ9UKJ0 227 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 HS3ST3B1Q9Y662 390 aa10.59□□□□□ -0.71
NPC1-202ENST00000540608 MUC3AQ02505 3323 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 SDK2Q58EX2 2172 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 SHANK1Q9Y566 2161 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 CLEC18AA5D8T8 446 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 ZNF732B4DXR9 585 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 KLK3P07288 261 aaPredicted RBP10.58□□□□□ -0.72
NPC1-202ENST00000540608 NPBWR2P48146 333 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 SLC25A26Q70HW3 274 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 ZNF611Q8N823 705 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 SUMF1Q8NBK3 374 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 CLEC18CQ8NCF0 446 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 MR1Q95460 341 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 SPSB4Q96A44 273 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 MUCL1Q96DR8 90 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 TMPRSS5Q9H3S3 457 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms