RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 IFI44Q8TCB0 444 aa9.75□□□□□ -0.85
PBX1-212ENST00000540236 ASB5Q8WWX0 329 aa9.75□□□□□ -0.85
PBX1-212ENST00000540236 ZNF385AQ96PM9 386 aaKnown RBP9.75□□□□□ -0.85
PBX1-212ENST00000540236 WDR81Q562E7 1941 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 CHRM2P08172 466 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 VSIG8P0DPA2 414 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 PLCXD2Q0VAA5 305 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 OVCA2Q8WZ82 227 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 ADAT3Q96EY9 351 aaPredicted RBP9.74□□□□□ -0.85
PBX1-212ENST00000540236 CCL26Q9Y258 94 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 NHSL1Q5SYE7 1610 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 A0A0B4J2E0 115 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 A0A1B0GX12 115 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 TMEM150CB9EJG8 249 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 BCAT2O15382 392 aaPredicted RBP9.74□□□□□ -0.85
PBX1-212ENST00000540236 MRPL49Q13405 166 aaKnown RBP9.74□□□□□ -0.85
PBX1-212ENST00000540236 FAM53BQ14153 422 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 HLA-BQ31612 363 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 ALKBH3Q96Q83 286 aaPredicted RBP9.74□□□□□ -0.85
PBX1-212ENST00000540236 PECRQ9BY49 303 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 NKX6-3A6NJ46 265 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 C11orf94C9JXX5 98 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 ADH5P11766 374 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 OR10V1Q8NGI7 309 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 TBL2Q9Y4P3 447 aaKnown RBP9.74□□□□□ -0.85
PBX1-212ENST00000540236 HBG1P69891 147 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 HBG2P69892 147 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 UBE2V1Q13404 147 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 FXYD3Q14802 87 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 BAHD1Q8TBE0 780 aaPredicted RBP9.74□□□□□ -0.85
PBX1-212ENST00000540236 VAX2Q9UIW0 290 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 CLEC18AA5D8T8 446 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 PGPEP1LA6NFU8 196 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 TMEM238C9JI98 176 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 PNRC1Q12796 327 aaPredicted RBP9.74□□□□□ -0.85
PBX1-212ENST00000540236 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.74□□□□□ -0.85
PBX1-212ENST00000540236 CLEC18CQ8NCF0 446 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 OR1N2Q8NGR9 330 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 MRPL30Q8TCC3 161 aaKnown RBP9.74□□□□□ -0.85
PBX1-212ENST00000540236 ACY3Q96HD9 319 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 WIPI2Q9Y4P8 454 aa9.74□□□□□ -0.85
PBX1-212ENST00000540236 F11RQ9Y624 299 aaKnown RBP9.74□□□□□ -0.85
PBX1-212ENST00000540236 RBBP6Q7Z6E9 1792 aaKnown RBP9.74□□□□□ -0.85
PBX1-212ENST00000540236 NTSR1P30989 418 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 LHX2P50458 406 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 PLAURQ03405 335 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 ZNF260Q3ZCT1 412 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 DHRS13Q6UX07 377 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 VSIRQ9H7M9 311 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 A0A1B0GV72 72 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 RPS15AP62244 130 aaKnown RBP9.73□□□□□ -0.85
PBX1-212ENST00000540236 ZNF808Q8N4W9 903 aaPredicted RBP9.73□□□□□ -0.85
PBX1-212ENST00000540236 NHLRC2Q8NBF2 726 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 RAB11FIP5Q9BXF6 653 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 PHIPQ8WWQ0 1821 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 ARPC3O15145 178 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 CDS2O95674 445 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 FAHP16930 419 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 ASB10Q8WXI3 467 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 GSX1Q9H4S2 264 aaPredicted RBP9.73□□□□□ -0.85
PBX1-212ENST00000540236 SLC17A3O00476 420 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 CXCL11O14625 94 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 HSPB1P04792 205 aaKnown RBP9.73□□□□□ -0.85
PBX1-212ENST00000540236 EFNA3P52797 238 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 PRSS41Q7RTY9 318 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 STPG3Q8N7X2 389 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 OR4B1Q8NGF8 309 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 ANAPC16Q96DE5 110 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 SRD5A3Q9H8P0 318 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 CES1P1Q9UKY3 287 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 ZNF735P0CB33 412 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 CLDN17P56750 224 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 TRA2BP62995 288 aaKnown RBP9.73□□□□□ -0.85
PBX1-212ENST00000540236 ZNF816Q0VGE8 651 aaPredicted RBP9.73□□□□□ -0.85
PBX1-212ENST00000540236 MRPL58Q14197 206 aaKnown RBP9.73□□□□□ -0.85
PBX1-212ENST00000540236 DEFB119Q8N690 84 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 OR10G4Q8NGN3 311 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 OR10G9Q8NGN4 311 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 OR10G7Q8NGN6 311 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 VOPP1Q96AW1 172 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 RTBDNQ9BSG5 229 aaPredicted RBP9.73□□□□□ -0.85
PBX1-212ENST00000540236 CST9LQ9H4G1 147 aa9.73□□□□□ -0.85
PBX1-212ENST00000540236 NRASP01111 189 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 KRASP01116 189 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 UMODP07911 640 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 ZNF121P58317 390 aaPredicted RBP9.72□□□□□ -0.85
PBX1-212ENST00000540236 C9orf135Q5VTT2 229 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 C1orf140Q5VVS0 124 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 CLDND2Q8NHS1 167 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 VN1R3Q9BXE9 311 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 ACTR3CQ9C0K3 210 aaPredicted RBP9.72□□□□□ -0.85
PBX1-212ENST00000540236 HRASLS2Q9NWW9 162 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 RALYQ9UKM9 306 aaKnown RBP9.72□□□□□ -0.85
PBX1-212ENST00000540236 LOC102723971A0A1B0GUV8 181 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 OR5B21A6NL26 309 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 OR1D4P47884 311 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 OCIAD2Q56VL3 154 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 TBC1D26Q86UD7 250 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 BCORP1Q8N888 145 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 PRSS37A4D1T9 235 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms