RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 ZNF880Q6PDB4 577 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 SYT13Q7L8C5 426 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 RD3Q7Z3Z2 195 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 LYPD6Q86Y78 171 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 SP8Q8IXZ3 490 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 SIGLECL1Q8N7X8 197 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 CSNK2A3Q8NEV1 391 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 OR10P1Q8NGE3 313 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 PLPPR1Q8TBJ4 325 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 MARCH1Q8TCQ1 289 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 VN1R17PQ8TDU5 208 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 TMEM37Q8WXS4 190 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 RAB1CQ92928 201 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 EID2BQ96D98 161 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 ABHD17AQ96GS6 310 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 C4orf45Q96LM5 186 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 UHRF2Q96PU4 802 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 SPIN2AQ99865 258 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 SPIN2BQ9BPZ2 258 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 PRSS27Q9BQR3 290 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 TXNDC17Q9BRA2 123 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 NICN1Q9BSH3 213 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 C11orf1Q9H5F2 150 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 MTHFD2LQ9H903 347 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-211ENST00000539921 PATZ1Q9HBE1 687 aaKnown RBP5.35□□□□□ -1.55
SNHG1-211ENST00000539921 GP6Q9HCN6 339 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 GPR27Q9NS67 375 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 SLC7A10Q9NS82 523 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 MRPL16Q9NX20 251 aaKnown RBP5.35□□□□□ -1.55
SNHG1-211ENST00000539921 ZNF581Q9P0T4 197 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 CRLS1Q9UJA2 301 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 JPT1Q9UK76 154 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 HIF3AQ9Y2N7 669 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 MED31Q9Y3C7 131 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 TRAPPC1Q9Y5R8 145 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 A0A0G2JMM0 328 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 A0A1W2PPB8 328 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 A0A1W2PR80 420 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 PSMB11A5LHX3 300 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 A6NDN8 102 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 CPSF4LA6NMK7 179 aaKnown RBP5.34□□□□□ -1.55
SNHG1-211ENST00000539921 KIR3DP1A8MWS1 328 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 KIAA1324LA8MWY0 1029 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-211ENST00000539921 K7EP34 96 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 SLC33A1O00400 549 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-211ENST00000539921 ZNF207O43670 478 aaKnown RBP5.34□□□□□ -1.55
SNHG1-211ENST00000539921 DUSP11O75319 330 aaKnown RBP5.34□□□□□ -1.55
SNHG1-211ENST00000539921 LYPD3O95274 346 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 GPR75O95800 540 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 HAND1O96004 215 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 IGLV3-27P01718 113 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 SERPINA7P05543 415 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 GPX1P07203 203 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 THBDP07204 575 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 CRISP2P16562 243 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 AZU1P20160 251 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 IL3RAP26951 378 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 DUSP1P28562 367 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 IL12BP29460 328 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 BSGP35613 385 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 ARL3P36405 182 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 MDH2P40926 338 aaKnown RBP5.34□□□□□ -1.55
SNHG1-211ENST00000539921 BCL6P41182 706 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 HINT1P49773 126 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-211ENST00000539921 SGSHP51688 502 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 SLC16A1P53985 500 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 RIPPLY3P57055 190 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 RPL23P62829 140 aaKnown RBP5.34□□□□□ -1.55
SNHG1-211ENST00000539921 CCL20P78556 96 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 SERF2P84101 59 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 FUT5Q11128 374 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 GNMTQ14749 295 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 EXOSC7Q15024 291 aaKnown RBP5.34□□□□□ -1.55
SNHG1-211ENST00000539921 ZNF658BQ4V348 819 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-211ENST00000539921 AGTRAPQ6RW13 159 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 GLB1LQ6UWU2 654 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 ASCL4Q6XD76 172 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 FA2HQ7L5A8 372 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 ZNF627Q7L945 461 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 PRRT2Q7Z6L0 340 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-211ENST00000539921 CDC20BQ86Y33 519 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 NECAP1Q8NC96 275 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 CHST13Q8NET6 341 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 OR1B1Q8NGR6 318 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 OR2AJ1Q8NGZ0 328 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 TMEM255BQ8WV15 326 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 OR5P3Q8WZ94 311 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 NINJ1Q92982 152 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 IL22RA2Q969J5 263 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 MBD6Q96DN6 1003 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 PCED1BQ96HM7 432 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 SUSD3Q96L08 255 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 SMIM7Q9BQ49 75 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 ULBP2Q9BZM5 246 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 PLEKHF2Q9H8W4 249 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 MED20Q9H944 212 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 CLDND1Q9NY35 253 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 FRRS1LQ9P0K9 344 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 CLEC1BQ9P126 229 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 B3GALT1Q9Y5Z6 326 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms