RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 Q8NFD4 153 aa11.98□□□□□ -0.49
ACTN1-205ENST00000538545 TREM2Q9NZC2 230 aa11.98□□□□□ -0.49
ACTN1-205ENST00000538545 PLSCR5A0PG75 271 aa11.98□□□□□ -0.49
ACTN1-205ENST00000538545 RPS2P15880 293 aaKnown RBP11.98□□□□□ -0.49
ACTN1-205ENST00000538545 CEACAM8P31997 349 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-205ENST00000538545 HERPUD1Q15011 391 aa11.98□□□□□ -0.49
ACTN1-205ENST00000538545 ELP2Q6IA86 826 aa11.98□□□□□ -0.49
ACTN1-205ENST00000538545 FAM53AQ6NSI3 398 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-205ENST00000538545 PEG10Q86TG7 708 aaKnown RBP11.98□□□□□ -0.49
ACTN1-205ENST00000538545 TMEM200AQ86VY9 491 aa11.98□□□□□ -0.49
ACTN1-205ENST00000538545 OR5M8Q8NGP6 311 aa11.98□□□□□ -0.49
ACTN1-205ENST00000538545 TMEM100Q9NV29 134 aa11.98□□□□□ -0.49
ACTN1-205ENST00000538545 C5orf51A6NDU8 294 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 A8MXE2 369 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 J3QT63 122 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 HOXB5P09067 269 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 SERPINF1P36955 418 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 IL24Q13007 206 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 ZMYND11Q15326 602 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 PHB2Q99623 299 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 NXPH2O95156 264 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 HTR2BP41595 481 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 ARL6IP1Q15041 203 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 C11orf53Q8IXP5 236 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 OR8G5Q8NG78 346 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 PPP1R1CQ8WVI7 109 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 ZNF286AQ9HBT8 521 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 NECAP2Q9NVZ3 263 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 TACC2O95359 2948 aa11.97□□□□□ -0.49
ACTN1-205ENST00000538545 IGKV1-6A0A0C4DH72 117 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 hCG_1807616A0A1W2PRN6 198 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 MCRIP1C9JLW8 97 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 OR2H2O95918 312 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 AADACP22760 399 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 DTYMKP23919 212 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 PPA1Q15181 289 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 FAM76BQ5HYJ3 339 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 BOLLQ8N9W6 283 aaKnown RBP11.96□□□□□ -0.49
ACTN1-205ENST00000538545 RELL2Q8NC24 303 aaPredicted RBP11.96□□□□□ -0.49
ACTN1-205ENST00000538545 OR2Z1Q8NG97 314 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 PLPPR1Q8TBJ4 325 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 SLX1AQ9BQ83 275 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 SLA2Q9H6Q3 261 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 DUS4LO95620 317 aaKnown RBP11.96□□□□□ -0.49
ACTN1-205ENST00000538545 GCH1P30793 250 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 PIGPP57054 158 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 TPRX1Q8N7U7 411 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 IL1F10Q8WWZ1 152 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 MYOZ1Q9NP98 299 aaPredicted RBP11.96□□□□□ -0.49
ACTN1-205ENST00000538545 PCDHB16Q9NRJ7 776 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 METRNQ9UJH8 293 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 PKD1L2Q7Z442 2459 aa11.96□□□□□ -0.49
ACTN1-205ENST00000538545 DEGS1O15121 323 aa11.96□□□□□ -0.5
ACTN1-205ENST00000538545 CA11O75493 328 aa11.96□□□□□ -0.5
ACTN1-205ENST00000538545 SFT2D2O95562 160 aa11.96□□□□□ -0.5
ACTN1-205ENST00000538545 FOXRED2Q8IWF2 684 aa11.96□□□□□ -0.5
ACTN1-205ENST00000538545 SAXO1Q8IYX7 474 aa11.96□□□□□ -0.5
ACTN1-205ENST00000538545 OR10C1Q96KK4 312 aa11.96□□□□□ -0.5
ACTN1-205ENST00000538545 GON7Q9BXV9 100 aa11.96□□□□□ -0.5
ACTN1-205ENST00000538545 TMEM165Q9HC07 324 aa11.96□□□□□ -0.5
ACTN1-205ENST00000538545 RCC2Q9P258 522 aaKnown RBP11.96□□□□□ -0.5
ACTN1-205ENST00000538545 SPTAN1Q13813 2472 aaKnown RBP11.95□□□□□ -0.5
ACTN1-205ENST00000538545 LRP5LA4QPB2 252 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 L7N2F9 121 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 PSPNO60542 156 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 NAPSAO96009 420 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 ZNF718Q3SXZ3 478 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 TIMM23BQ5SRD1 257 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 FAM201AQ5SY85 155 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 Q6P435 159 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 ZCCHC24Q8N2G6 241 aaKnown RBP11.95□□□□□ -0.5
ACTN1-205ENST00000538545 MUCL1Q96DR8 90 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 USB1Q9BQ65 265 aaKnown RBP11.95□□□□□ -0.5
ACTN1-205ENST00000538545 ASH1LQ9NR48 2969 aaKnown RBP11.95□□□□□ -0.5
ACTN1-205ENST00000538545 IGKV1D-13A0A0B4J2D9 117 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 TEX13DA0A0J9YY54 714 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-205ENST00000538545 CEACAM18A8MTB9 384 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 IGKV1-13P0DP09 117 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 HOXB1P14653 301 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-205ENST00000538545 TMPRSS3P57727 454 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 RGS7BPQ6MZT1 257 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-205ENST00000538545 LDLRAD3Q86YD5 345 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 WFDC8Q8IUA0 241 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 TMEM185AQ8NFB2 350 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 MRPL30Q8TCC3 161 aaKnown RBP11.95□□□□□ -0.5
ACTN1-205ENST00000538545 SFXN3Q9BWM7 321 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 ESRP2Q9H6T0 727 aaKnown RBP11.95□□□□□ -0.5
ACTN1-205ENST00000538545 Q9N2K0 584 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 EDARQ9UNE0 448 aa11.95□□□□□ -0.5
ACTN1-205ENST00000538545 DSCAMO60469 2012 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 ZSCAN5BA6NJL1 495 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 DHODHQ02127 395 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 OPCMLQ14982 345 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 PAN3Q58A45 887 aaKnown RBP11.94□□□□□ -0.5
ACTN1-205ENST00000538545 TMEM211Q6ICI0 200 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 SECTM1Q8WVN6 248 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 NRIP2Q9BQI9 281 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 TRAF4Q9BUZ4 470 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-205ENST00000538545 PKIBQ9C010 78 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 ARL6Q9H0F7 186 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms