RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 SCTP09683 121 aa21.35■■□□□ 1.01
RAB40C-204ENST00000538492 ESPL1Q14674 2120 aa21.35■■□□□ 1.01
RAB40C-204ENST00000538492 TGIF1Q15583 401 aa21.35■■□□□ 1.01
RAB40C-204ENST00000538492 LRTM2Q8N967 370 aa21.35■■□□□ 1.01
RAB40C-204ENST00000538492 BSCL2Q96G97 398 aaPredicted RBP21.35■■□□□ 1.01
RAB40C-204ENST00000538492 ARGFXA6NJG6 315 aa21.34■■□□□ 1.01
RAB40C-204ENST00000538492 PMELP40967 661 aa21.34■■□□□ 1.01
RAB40C-204ENST00000538492 WNT5AP41221 380 aa21.34■■□□□ 1.01
RAB40C-204ENST00000538492 LPAR6P43657 344 aa21.34■■□□□ 1.01
RAB40C-204ENST00000538492 GUCA2BQ16661 112 aa21.34■■□□□ 1.01
RAB40C-204ENST00000538492 HAGHLQ6PII5 290 aaPredicted RBP21.34■■□□□ 1.01
RAB40C-204ENST00000538492 LGI3Q8N145 548 aa21.34■■□□□ 1.01
RAB40C-204ENST00000538492 HIST1H2AAQ96QV6 131 aa21.34■■□□□ 1.01
RAB40C-204ENST00000538492 TREM1Q9NP99 234 aa21.34■■□□□ 1.01
RAB40C-204ENST00000538492 H7C1Q1 480 aa21.34■■□□□ 1.01
RAB40C-204ENST00000538492 RNFT1Q5M7Z0 435 aa21.34■■□□□ 1.01
RAB40C-204ENST00000538492 EIF5AL1Q6IS14 154 aaKnown RBP21.34■■□□□ 1.01
RAB40C-204ENST00000538492 CCDC71LQ8N9Z2 235 aa21.34■■□□□ 1.01
RAB40C-204ENST00000538492 SMIM8Q96KF7 97 aa21.34■■□□□ 1.01
RAB40C-204ENST00000538492 GPHA2Q96T91 129 aa21.34■■□□□ 1.01
RAB40C-204ENST00000538492 ADAT1Q9BUB4 502 aaKnown RBP21.34■■□□□ 1.01
RAB40C-204ENST00000538492 FAM90A10PA6NDY2 464 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 FAM90A18PA6NE21 464 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 FAM90A16PA6NEW6 464 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 FAM90A20PA6NIJ5 464 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 FAM90A8PA6NJQ4 464 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 FAM90A7PA6NKC0 464 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 FAM90A22PA8MWA6 464 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 FAM90A12PA8MX19 464 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 FAM90A5PA8MXJ8 464 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 FAM90A23PA8MXZ1 464 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 TRIM77I1YAP6 450 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 IL18BPO95998 194 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 FAM90A15PP0C7V4 464 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 FAM90A13PP0C7W8 464 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 FAM90A14PP0C7W9 464 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 FAM90A24PP0C7X0 464 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 IGFBP7Q16270 282 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 TMEM268Q5VZI3 342 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 SLC35G3Q8N808 338 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 SECTM1Q8WVN6 248 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 Q9N2K0 584 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 PLA2G2EQ9NZK7 142 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 FAM96BQ9Y3D0 163 aa21.33■■□□□ 1.01
RAB40C-204ENST00000538492 CD46P15529 392 aa21.33■■□□□ 1
RAB40C-204ENST00000538492 PRKACAP17612 351 aa21.33■■□□□ 1
RAB40C-204ENST00000538492 GNRHRP30968 328 aa21.33■■□□□ 1
RAB40C-204ENST00000538492 APLNRP35414 380 aa21.33■■□□□ 1
RAB40C-204ENST00000538492 SPIN3Q5JUX0 258 aa21.33■■□□□ 1
RAB40C-204ENST00000538492 FBXW12Q6X9E4 464 aa21.33■■□□□ 1
RAB40C-204ENST00000538492 MKXQ8IYA7 352 aa21.33■■□□□ 1
RAB40C-204ENST00000538492 SAXO1Q8IYX7 474 aa21.33■■□□□ 1
RAB40C-204ENST00000538492 ZFP62Q8NB50 900 aaPredicted RBP21.33■■□□□ 1
RAB40C-204ENST00000538492 E5RGE8 158 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 F8W036 122 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 MPPED1O15442 326 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 JTBO76095 146 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 BLOC1S1P78537 153 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 PJVKQ0ZLH3 352 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 CLN3Q13286 438 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 ZNF169Q14929 603 aaPredicted RBP21.32■■□□□ 1
RAB40C-204ENST00000538492 SPATA46Q5T0L3 261 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 TMPRSS7Q7RTY8 843 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 PUSL1Q8N0Z8 303 aaKnown RBP21.32■■□□□ 1
RAB40C-204ENST00000538492 IP6K3Q96PC2 410 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 FAM86C1Q9NVL1 165 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 NSG2Q9Y328 171 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 C3orf85A0A1B0GTC6 90 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 NAPSAO96009 420 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 OR5A2Q8NGI9 324 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 PLEKHA2Q9HB19 425 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 SPRR3Q9UBC9 169 aa21.32■■□□□ 1
RAB40C-204ENST00000538492 FBXO9Q9UK97 447 aaPredicted RBP21.32■■□□□ 1
RAB40C-204ENST00000538492 IL32P24001 234 aa21.31■■□□□ 1
RAB40C-204ENST00000538492 ID4P47928 161 aa21.31■■□□□ 1
RAB40C-204ENST00000538492 ARG2P78540 354 aa21.31■■□□□ 1
RAB40C-204ENST00000538492 HERPUD1Q15011 391 aa21.31■■□□□ 1
RAB40C-204ENST00000538492 OR5P3Q8WZ94 311 aa21.31■■□□□ 1
RAB40C-204ENST00000538492 SAT2Q96F10 170 aaPredicted RBP21.31■■□□□ 1
RAB40C-204ENST00000538492 PARP12Q9H0J9 701 aaKnown RBP21.31■■□□□ 1
RAB40C-204ENST00000538492 PLSCR2Q9NRY7 297 aa21.31■■□□□ 1
RAB40C-204ENST00000538492 AGPAT2O15120 278 aa21.31■■□□□ 1
RAB40C-204ENST00000538492 F12P00748 615 aaPredicted RBP21.31■■□□□ 1
RAB40C-204ENST00000538492 TK1P04183 234 aa21.31■■□□□ 1
RAB40C-204ENST00000538492 DPPA2Q7Z7J5 298 aa21.31■■□□□ 1
RAB40C-204ENST00000538492 RHOFQ9HBH0 211 aa21.31■■□□□ 1
RAB40C-204ENST00000538492 RCC2Q9P258 522 aaKnown RBP21.31■■□□□ 1
RAB40C-204ENST00000538492 ANKRD30BLA7E2S9 258 aa21.3■■□□□ 1
RAB40C-204ENST00000538492 OR2T2Q6IF00 324 aa21.3■■□□□ 1
RAB40C-204ENST00000538492 IL34Q6ZMJ4 242 aa21.3■■□□□ 1
RAB40C-204ENST00000538492 C17orf78Q8N4C9 275 aa21.3■■□□□ 1
RAB40C-204ENST00000538492 OR1K1Q8NGR3 316 aa21.3■■□□□ 1
RAB40C-204ENST00000538492 POM121Q96HA1 1249 aa21.3■■□□□ 1
RAB40C-204ENST00000538492 WDYHV1Q96HA8 205 aa21.3■■□□□ 1
RAB40C-204ENST00000538492 TLNRD1Q9H1K6 362 aa21.3■■□□□ 1
RAB40C-204ENST00000538492 TMEM9BQ9NQ34 198 aa21.3■■□□□ 1
RAB40C-204ENST00000538492 HS3ST1O14792 307 aa21.3■■□□□ 1
RAB40C-204ENST00000538492 GAPDHP04406 335 aaKnown RBP21.3■■□□□ 1
RAB40C-204ENST00000538492 TBC1D26Q86UD7 250 aa21.3■■□□□ 1
RAB40C-204ENST00000538492 SVBPQ8N300 66 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms